Ss1.1-rplun0130_e17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAGCCAAACAGTTATTTGGACGCTTACTCTTTAATGATCCGGACCTGCGCGAAGTCTG GCTCAATTATCCTCTCCACCCACTCCAGCTTCAAGAGCCAAATACCGATCGACAACTTAT TGAGACATCTCCAGTTCTACAGAAACTTACTGAATTTGAAGATGCAATTGGAGTAATTTT TACCCATGTTCGACTTCTGGCAAGAGCATTCACATTGAGAACTGTGGGATTTAATCATCT GACCCTAGGCCACAATCAGAGGATGGAATTCCTAGGTGACTCCATAATGCAGCTGGTAGC CACAGAATACTTATTCATTCATTTTCCAGATCATCATGAAGGACACTTAACTTTGTTGCG AAGCTCTTTGGTGAACAACAGAACTCAAGCCAAGGTCGCCGAGGAACTGGGCATGCAGGA ATACGCCATCACCAATGACAAGACCAAGAGGCCTGTGGCCCTTCGGACCAAGACATTGGC AGACCTTTTGGAATCATTTATCGCAGCCCTATACATTGACAAGGACTTGGAATATGTTCA TACTTTCATGAATGTCTGTTTCTTTCCACGACTAAAAGAGTTCATTTTGAATCAGGATTG GAATGACCCCAAGTCCCAGCTTCAGCAGTGTTGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAGCCAAACAGTTATTTGGACGCTTACTCTTTAATGATCCGGACCTGCGCGAAGTCTG GCTCAATTATCCTCTCCACCCACTCCAGCTTCAAGAGCCAAATACCGATCGACAACTTAT TGAGACATCTCCAGTTCTACAGAAACTTACTGAATTTGAAGATGCAATTGGAGTAATTTT TACCCATGTTCGACTTCTGGCAAGAGCATTCACATTGAGAACTGTGGGATTTAATCATCT GACCCTAGGCCACAATCAGAGGATGGAATTCCTAGGTGACTCCATAATGCAGCTGGTAGC CACAGAATACTTATTCATTCATTTTCCAGATCATCATGAAGGACACTTAACTTTGTTGCG AAGCTCTTTGGTGAACAACAGAACTCAAGCCAAGGTCGCCGAGGAACTGGGCATGCAGGA ATACGCCATCACCAATGACAAGACCAAGAGGCCTGTGGCCCTTCGGACCAAGACATTGGC AGACCTTTTGGAATCATTTATCGCAGCCCTATACATTGACAAGGACTTGGAATATGTTCA TACTTTCATGAATGTCTGTTTCTTTCCACGACTAAAAGAGTTCATTTTGAATCAGGATTG GAATGACCCCAAGTCCCAGCTTCAGCAGTGTTGTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 87-246, gnl|bosTau2|chr20 (27469236-27469394) | |
| 87-246, gnl|canFam2|chr4 (79070888-79070708) | |
| 87-246, gnl|danRer3|chr12 (16922601-16922780) | |
| 87-246, gnl|dasNov1|scaffold_40697 (9881-9706) | |
| 87-246, gnl|echTel1|scaffold_308702 (50946-51126) | |
| 87-246, gnl|fr1|chrUn (152855249-152855420) | |
| 87-246, gnl|galGal2|chr2 (68977346-68977166) | |
| 87-246, gnl|hg17|chr5 (31458646-31458826) | |
| 87-246, gnl|Hg17|chr5 (31458810-31458651) | |
| 87-246, gnl|mm7|chr15 (12974025-12973843) | |
| 87-246, gnl|Mm7|chr15 (12973859-12974018) | |
| 87-246, gnl|monDom2|scaffold_4 (62478334-62478515) | |
| 87-246, gnl|oryCun1|scaffold_198362 (97649-97469) | |
| 87-246, gnl|panTro1|chr4 (85942821-85942641) | |
| 87-246, gnl|rheMac2|chr6 (31485361-31485541) | |
| 87-246, gnl|rn3|chr2 (62356303-62356122) | |
| 87-246, gnl|tetNig1|chrUn_random (132660589-132660757) | |
| 87-246, gnl|xenTro1|scaffold_954 (318134-318314) | |
| 354-494, gnl|bosTau2|chr20 (27482218-27482358) | |
| 354-494, gnl|canFam2|chr4 (79083680-79083494) | |
| 354-494, gnl|danRer3|chr12 (16915809-16915967) | |
| 354-494, gnl|echTel1|scaffold_296695 (406-591) | |
| 354-494, gnl|fr1|chrUn (152850865-152851046) | |
| 354-494, gnl|galGal2|chr2 (68981704-68981524) | |
| 354-494, gnl|hg17|chr5 (31446605-31446791) | |
| 354-494, gnl|Hg17|chr5 (31446750-31446610) | |
| 354-494, gnl|loxAfr1|scaffold_28305 (36449-36635) | |
| 354-494, gnl|mm7|chr15 (12984166-12983980) | |
| 354-494, gnl|Mm7|chr15 (12984019-12984159) | |
| 354-494, gnl|monDom2|scaffold_4 (62464503-62464688) | |
| 354-494, gnl|oryCun1|scaffold_212140 (8337-8163) | |
| 354-494, gnl|panTro1|chr4 (85954912-85954726) | |
| 354-494, gnl|rheMac2|chr6 (31472813-31472999) | |
| 354-494, gnl|rn3|chr2 (62366729-62366543) | |
| 354-494, gnl|tetNig1|chrUn_random (132656678-132656856) | |
| 354-494, gnl|xenTro1|scaffold_954 (311947-312124) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 87-246, gnl|bosTau2|chr20 (27469236-27469394) | |
| 87-246, gnl|canFam2|chr4 (79070888-79070708) | |
| 87-246, gnl|danRer3|chr12 (16922601-16922780) | |
| 87-246, gnl|dasNov1|scaffold_40697 (9881-9706) | |
| 87-246, gnl|echTel1|scaffold_308702 (50946-51126) | |
| 87-246, gnl|fr1|chrUn (152855249-152855420) | |
| 87-246, gnl|galGal2|chr2 (68977346-68977166) | |
| 87-246, gnl|hg17|chr5 (31458646-31458826) | |
| 87-246, gnl|Hg17|chr5 (31458810-31458651) | |
| 87-246, gnl|mm7|chr15 (12974025-12973843) | |
| 87-246, gnl|Mm7|chr15 (12973859-12974018) | |
| 87-246, gnl|monDom2|scaffold_4 (62478334-62478515) | |
| 87-246, gnl|oryCun1|scaffold_198362 (97649-97469) | |
| 87-246, gnl|panTro1|chr4 (85942821-85942641) | |
| 87-246, gnl|rheMac2|chr6 (31485361-31485541) | |
| 87-246, gnl|rn3|chr2 (62356303-62356122) | |
| 87-246, gnl|tetNig1|chrUn_random (132660589-132660757) | |
| 87-246, gnl|xenTro1|scaffold_954 (318134-318314) | |
| 354-494, gnl|bosTau2|chr20 (27482218-27482358) | |
| 354-494, gnl|canFam2|chr4 (79083680-79083494) | |
| 354-494, gnl|danRer3|chr12 (16915809-16915967) | |
| 354-494, gnl|echTel1|scaffold_296695 (406-591) | |
| 354-494, gnl|fr1|chrUn (152850865-152851046) | |
| 354-494, gnl|galGal2|chr2 (68981704-68981524) | |
| 354-494, gnl|hg17|chr5 (31446605-31446791) | |
| 354-494, gnl|Hg17|chr5 (31446750-31446610) | |
| 354-494, gnl|loxAfr1|scaffold_28305 (36449-36635) | |
| 354-494, gnl|mm7|chr15 (12984166-12983980) | |
| 354-494, gnl|Mm7|chr15 (12984019-12984159) | |
| 354-494, gnl|monDom2|scaffold_4 (62464503-62464688) | |
| 354-494, gnl|oryCun1|scaffold_212140 (8337-8163) | |
| 354-494, gnl|panTro1|chr4 (85954912-85954726) | |
| 354-494, gnl|rheMac2|chr6 (31472813-31472999) | |
| 354-494, gnl|rn3|chr2 (62366729-62366543) | |
| 354-494, gnl|tetNig1|chrUn_random (132656678-132656856) | |
| 354-494, gnl|xenTro1|scaffold_954 (311947-312124) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.150489) |