Non-Coding RNA Search

Ss1.1-rplun0132_m10.5

Sequence:


               
               AACTTCTTTTCTTATGACAAAAGATCGGCTTTAAAATTTAGATGTTTGAACATAAACATG
TTTTACCCATTTGGTTATAATATTTTTTGAGAAGTTAAAAAAATAAGATGAACTTCCTTT
TTTGAAACTAGT------------------------------------------------
------------------------ATCTGAGCTACAGTCATTCGCAACCTAAGCCATAGC
TGTGGAAATGCTGGATTTTTCACCCACTCAGACAGGCTGGGGATTGAACCTGCATCCCGG
CCTTCCCAAGACACTGCCAATCCCTTCATGCCACAGTAGGAACTCCATCCAACTATTTTT
TAGCATGAATAATTTTCATATTTTTCAAACTGATTGTGATGTTTATTCCACTGTGAGGTT
TTAACCTTGCTCTTTGCTAATAGGATAATACTTATAATTGTGCATTCGGCCAAAGAACCA
ACTTCAGATCTCTGCAAATTTGGGCATTTCAAAATGTGATTTGTCTTAGTCCTAAATGGC
AAGACTTTCTTCCTAGAGGTCTAACTTGGAGAAGACACCTTTTTTGTTTGTAATTAACTT
AGTGAGAAGTAGATGTTAAGTTAATGACTCTGAGGGTCGATGAGGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTTCTTTTCTTATGACAAAAGATCGGCTTTAAAATTTAGATGTTTGAACATAAACATG
TTTTACCCATTTGGTTATAATATTTTTTGAGAAGTTAAAAAAATAAGATGAACTTCCTTT
TTTGAAACTAGT------------------------------------------------
------------------------ATCTGAGCTACAGTCATTCGCAACCTAAGCCATAGC
TGTGGAAATGCTGGATTTTTCACCCACTCAGACAGGCTGGGGATTGAACCTGCATCCCGG
CCTTCCCAAGACACTGCCAATCCCTTCATGCCACAGTAGGAACTCCATCCAACTATTTTT
TAGCATGAATAATTTTCATATTTTTCAAACTGATTGTGATGTTTATTCCACTGTGAGGTT
TTAACCTTGCTCTTTGCTAATAGGATAATACTTATAATTGTGCATTCGGCCAAAGAACCA
ACTTCAGATCTCTGCAAATTTGGGCATTTCAAAATGTGATTTGTCTTAGTCCTAAATGGC
AAGACTTTCTTCCTAGAGGTCTAACTTGGAGAAGACACCTTTTTTGTTTGTAATTAACTT
AGTGAGAAGTAGATGTTAAGTTAATGACTCTGAGGGTCGATGAGGAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               7-132, gnl|bosTau2|chr28 (25536646-25536518)
               


               
               273-549, gnl|bosTau2|chr28 (25536381-25536105)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-132, gnl|bosTau2|chr28 (25536646-25536518)
               


               
               273-549, gnl|bosTau2|chr28 (25536381-25536105)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lun (0.451467)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lun (0.451467)

	7-132, gnl\|bosTau2\|chr28 (25536646-25536518)

	273-549, gnl\|bosTau2\|chr28 (25536381-25536105)