Non-Coding RNA Search

Ss1.1-rplun0134_p9.5

Sequence:


               
               GTCAGAAGTAGTAAGTTCACCTCCTTACTGGTGGTGGACCTTATTCAAGGGCTACAACTC
AGATCCTGGCTTGGGGAATCCTACGATATAAAAGAAGGTGGTAAACACATGGGCTAGATC
TAATATTCTGACAAGTTTGTATGTGCGTGTTCAAAATCCATATATCTAATTTGTTATCAA
GGAGGAAGGCAGTGCCGTAAAATGTAGGAATTTCAAATTTTGTTGTTCAGAATCAGAGGA
TTTGACTTAGAATCCAGGTTCTACTCGTTAGAGCTTGGATCACTAGCTAGTAATTTCACT
TCTTTCTCCAAACTCAGTTTTTTAAATTTCTTTCTTTTTTTTTTTTTTTGCCTTTTTTTT
GTTGTTGTTGTTGCTGTTGTTGTTGCTCCCGCGGCATATGGAGATTCCCAGGCTAGGGGT
TGAATCGGAGCTGTAGCCACCGGCCTACGCCAGAGCCACAGCAACGCGGGATCCGAGCCG
CGTCGGCAACCTACACCACAGCTCACGGCAACGCCGGATCGTTAACCCACTGAGCAAGGG
CAGGGACCGAACCGGCAACCTCATGGTTCCTAGTCGGATTCGTTAACCACTGCGCCACGA
------------------------TCTAAAGTGAGGATAATGATTTTCACCTCAATGAGT
TTTGTGGAAATTAAAAATTATACATTGTGTAAATGCTTAGCACAGTGCCATCAATAAACA
GTTTTTTTTTGTTGTTCTTATTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCAGAAGTAGTAAGTTCACCTCCTTACTGGTGGTGGACCTTATTCAAGGGCTACAACTC
AGATCCTGGCTTGGGGAATCCTACGATATAAAAGAAGGTGGTAAACACATGGGCTAGATC
TAATATTCTGACAAGTTTGTATGTGCGTGTTCAAAATCCATATATCTAATTTGTTATCAA
GGAGGAAGGCAGTGCCGTAAAATGTAGGAATTTCAAATTTTGTTGTTCAGAATCAGAGGA
TTTGACTTAGAATCCAGGTTCTACTCGTTAGAGCTTGGATCACTAGCTAGTAATTTCACT
TCTTTCTCCAAACTCAGTTTTTTAAATTTCTTTCTTTTTTTTTTTTTTTGCCTTTTTTTT
GTTGTTGTTGTTGCTGTTGTTGTTGCTCCCGCGGCATATGGAGATTCCCAGGCTAGGGGT
TGAATCGGAGCTGTAGCCACCGGCCTACGCCAGAGCCACAGCAACGCGGGATCCGAGCCG
CGTCGGCAACCTACACCACAGCTCACGGCAACGCCGGATCGTTAACCCACTGAGCAAGGG
CAGGGACCGAACCGGCAACCTCATGGTTCCTAGTCGGATTCGTTAACCACTGCGCCACGA
------------------------TCTAAAGTGAGGATAATGATTTTCACCTCAATGAGT
TTTGTGGAAATTAAAAATTATACATTGTGTAAATGCTTAGCACAGTGCCATCAATAAACA
GTTTTTTTTTGTTGTTCTTATTAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               88-326, gnl|bosTau2|chr5 (33288660-33288896)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               88-326, gnl|bosTau2|chr5 (33288660-33288896)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               cli (0.305623)
               

               
               eli (0.151814)
               

               
               lun (0.150489)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.305623)
               

               
               eli (0.151814)
               

               
               lun (0.150489)