Ss1.1-rplun0140_g4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGAATCGGCACAGGCACTCTCAAGCAGTCTTGGAATTGGGTCCGCCCACTGTGGAAGGC ATTGGTTTGACCTAAAGTCCTCAGATACCATATGGAACATTAGTGACACGGGGTGGATCA AAGCTTCCCTTGGCAGTCTGTTTTCCCCCTGGCTTATGGGATCCTGTGTCTTTGTGCATC GGATGGCCCAGTTTGACACTGACACCGTCCTAGATGTGCTTGCCACTTATCCCATCACGA CCCTGTGCGGCCCTCCCACCATCTACCGTATGCTTGTGCAAAAAGACCTTAGGAGGTACA AATTTAAGAGCCTGAAGCACTGCCTGACAGGAGGGGAGCCACTCAATCCAGAGGTGCTGG AACAGTGGAGGGCGCAAACTGGGCTGAACTTGTATGAGGGCTACGGACAGACAGAAGTGG GATTAATTTGTGCCAGTTACAAAGGACAAGAAATTAAACCAGGCTCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGAATCGGCACAGGCACTCTCAAGCAGTCTTGGAATTGGGTCCGCCCACTGTGGAAGGC ATTGGTTTGACCTAAAGTCCTCAGATACCATATGGAACATTAGTGACACGGGGTGGATCA AAGCTTCCCTTGGCAGTCTGTTTTCCCCCTGGCTTATGGGATCCTGTGTCTTTGTGCATC GGATGGCCCAGTTTGACACTGACACCGTCCTAGATGTGCTTGCCACTTATCCCATCACGA CCCTGTGCGGCCCTCCCACCATCTACCGTATGCTTGTGCAAAAAGACCTTAGGAGGTACA AATTTAAGAGCCTGAAGCACTGCCTGACAGGAGGGGAGCCACTCAATCCAGAGGTGCTGG AACAGTGGAGGGCGCAAACTGGGCTGAACTTGTATGAGGGCTACGGACAGACAGAAGTGG GATTAATTTGTGCCAGTTACAAAGGACAAGAAATTAAACCAGGCTCAA |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 57-217, gnl|bosTau2|chr25 (18382054-18382214) | |
| 57-217, gnl|canFam2|chr6 (27654636-27654428) | |
| 57-217, gnl|canFam2|chr6 (27654636-27654428) | |
| 57-217, gnl|canFam2|chr6 (27654608-27654469) | |
| 57-217, gnl|danRer3|chr2 (40332938-40333123) | |
| 57-217, gnl|danRer3|chr2 (40332938-40333123) | |
| 57-217, gnl|dasNov1|scaffold_5189 (22490-22689) | |
| 57-217, gnl|dasNov1|scaffold_5189 (22490-22689) | |
| 57-217, gnl|echTel1|scaffold_107680 (327-455) | |
| 57-217, gnl|echTel1|scaffold_219616 (4509-4310) | |
| 57-217, gnl|echTel1|scaffold_219616 (4509-4310) | |
| 57-217, gnl|galGal2|chrUn (38989392-38989215) | |
| 57-217, gnl|galGal2|chrUn (38989413-38989215) | |
| 57-217, gnl|hg17|chr12 (7361852-7362051) | |
| 57-217, gnl|hg17|chr16 (20638013-20638213) | |
| 57-217, gnl|Hg17|chr16 (20638048-20638209) | |
| 57-217, gnl|hg17|chrX (50663460-50663592) | |
| 57-217, gnl|loxAfr1|scaffold_49681 (6359-6160) | |
| 57-217, gnl|loxAfr1|scaffold_49681 (6359-6160) | |
| 57-217, gnl|mm7|chr7 (115627140-115627336) | |
| 57-217, gnl|mm7|chr7 (115627140-115627336) | |
| 57-217, gnl|Mm7|chr7 (115627172-115627332) | |
| 57-217, gnl|monDom2|scaffold_19 (41053394-41053598) | |
| 57-217, gnl|monDom2|scaffold_19 (41053403-41053598) | |
| 57-217, gnl|oryCun1|scaffold_214384 (35517-35694) | |
| 57-217, gnl|oryCun1|scaffold_214384 (35517-35694) | |
| 57-217, gnl|oryCun1|scaffold_214384 (35525-35653) | |
| 57-217, gnl|panTro1|chr10 (7925782-7925981) | |
| 57-217, gnl|panTro1|chr18 (21059029-21059229) | |
| 57-217, gnl|panTro1|chr8 (98594307-98594447) | |
| 57-217, gnl|rheMac2|chr11 (7589429-7589628) | |
| 57-217, gnl|rheMac2|chr11 (7589429-7589628) | |
| 57-217, gnl|rheMac2|chrX (48717738-48717876) | |
| 57-217, gnl|rn3|chr1 (178124872-178125068) | |
| 57-217, gnl|rn3|chr1 (178124872-178125068) | |
| 57-217, gnl|rn3|chr1 (178124891-178125027) | |
| 57-217, gnl|xenTro1|scaffold_6 (3600572-3600382) | |
| 57-217, gnl|xenTro1|scaffold_6 (3600562-3600382) | |
| 294-423, gnl|bosTau2|chr25 (18386176-18386305) | |
| 294-423, gnl|canFam2|chr6 (27902618-27902767) | |
| 294-423, gnl|danRer3|chr2 (40335221-40335085) | |
| 294-423, gnl|dasNov1|scaffold_2924 (119650-119523) | |
| 294-423, gnl|echTel1|scaffold_94861 (2007-2147) | |
| 294-423, gnl|hg17|chr16 (20466867-20467023) | |
| 294-423, gnl|Hg17|chr16 (20646164-20646293) | |
| 294-423, gnl|loxAfr1|scaffold_49681 (1353-1507) | |
| 294-423, gnl|mm7|chr7 (115503031-115502877) | |
| 294-423, gnl|Mm7|chr7 (115630917-115631046) | |
| 294-423, gnl|monDom2|scaffold_19 (40926855-40926689) | |
| 294-423, gnl|oryCun1|scaffold_179406 (82573-82417) | |
| 294-423, gnl|panTro1|chr18 (20905289-20905445) | |
| 294-423, gnl|rheMac2|chr20 (19474559-19474403) | |
| 294-423, gnl|rn3|chr1 (177992298-177992143) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 57-217, gnl|bosTau2|chr25 (18382054-18382214) | |
| 57-217, gnl|canFam2|chr6 (27654636-27654428) | |
| 57-217, gnl|canFam2|chr6 (27654636-27654428) | |
| 57-217, gnl|canFam2|chr6 (27654608-27654469) | |
| 57-217, gnl|danRer3|chr2 (40332938-40333123) | |
| 57-217, gnl|danRer3|chr2 (40332938-40333123) | |
| 57-217, gnl|dasNov1|scaffold_5189 (22490-22689) | |
| 57-217, gnl|dasNov1|scaffold_5189 (22490-22689) | |
| 57-217, gnl|echTel1|scaffold_107680 (327-455) | |
| 57-217, gnl|echTel1|scaffold_219616 (4509-4310) | |
| 57-217, gnl|echTel1|scaffold_219616 (4509-4310) | |
| 57-217, gnl|galGal2|chrUn (38989392-38989215) | |
| 57-217, gnl|galGal2|chrUn (38989413-38989215) | |
| 57-217, gnl|hg17|chr12 (7361852-7362051) | |
| 57-217, gnl|hg17|chr16 (20638013-20638213) | |
| 57-217, gnl|Hg17|chr16 (20638048-20638209) | |
| 57-217, gnl|hg17|chrX (50663460-50663592) | |
| 57-217, gnl|loxAfr1|scaffold_49681 (6359-6160) | |
| 57-217, gnl|loxAfr1|scaffold_49681 (6359-6160) | |
| 57-217, gnl|mm7|chr7 (115627140-115627336) | |
| 57-217, gnl|mm7|chr7 (115627140-115627336) | |
| 57-217, gnl|Mm7|chr7 (115627172-115627332) | |
| 57-217, gnl|monDom2|scaffold_19 (41053394-41053598) | |
| 57-217, gnl|monDom2|scaffold_19 (41053403-41053598) | |
| 57-217, gnl|oryCun1|scaffold_214384 (35517-35694) | |
| 57-217, gnl|oryCun1|scaffold_214384 (35517-35694) | |
| 57-217, gnl|oryCun1|scaffold_214384 (35525-35653) | |
| 57-217, gnl|panTro1|chr10 (7925782-7925981) | |
| 57-217, gnl|panTro1|chr18 (21059029-21059229) | |
| 57-217, gnl|panTro1|chr8 (98594307-98594447) | |
| 57-217, gnl|rheMac2|chr11 (7589429-7589628) | |
| 57-217, gnl|rheMac2|chr11 (7589429-7589628) | |
| 57-217, gnl|rheMac2|chrX (48717738-48717876) | |
| 57-217, gnl|rn3|chr1 (178124872-178125068) | |
| 57-217, gnl|rn3|chr1 (178124872-178125068) | |
| 57-217, gnl|rn3|chr1 (178124891-178125027) | |
| 57-217, gnl|xenTro1|scaffold_6 (3600572-3600382) | |
| 57-217, gnl|xenTro1|scaffold_6 (3600562-3600382) | |
| 294-423, gnl|bosTau2|chr25 (18386176-18386305) | |
| 294-423, gnl|canFam2|chr6 (27902618-27902767) | |
| 294-423, gnl|danRer3|chr2 (40335221-40335085) | |
| 294-423, gnl|dasNov1|scaffold_2924 (119650-119523) | |
| 294-423, gnl|echTel1|scaffold_94861 (2007-2147) | |
| 294-423, gnl|hg17|chr16 (20466867-20467023) | |
| 294-423, gnl|Hg17|chr16 (20646164-20646293) | |
| 294-423, gnl|loxAfr1|scaffold_49681 (1353-1507) | |
| 294-423, gnl|mm7|chr7 (115503031-115502877) | |
| 294-423, gnl|Mm7|chr7 (115630917-115631046) | |
| 294-423, gnl|monDom2|scaffold_19 (40926855-40926689) | |
| 294-423, gnl|oryCun1|scaffold_179406 (82573-82417) | |
| 294-423, gnl|panTro1|chr18 (20905289-20905445) | |
| 294-423, gnl|rheMac2|chr20 (19474559-19474403) | |
| 294-423, gnl|rn3|chr1 (177992298-177992143) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.330469) | |
| lun (0.150489) |