Non-Coding RNA Search

Ss1.1-rpro19_c11.5

Sequence:


               
               AATTCAATTAGACATTGAATTTCAGCTCAGTATCTATTACAAGGAATTATTAATAAAGTT
GTTTATTGACAACATAAATCCAAGGCTCTAACATGTCTTGTTAACTTTCAGCCCCTGGGA
GATGTGGGAAATAAGGTTTCTTAATATAAACATTATTACTTATTTGAGTGACTTCATATC
CAAGGAGTATGGCCACTGGGACCAGACTGTCCAAATCCCAATCTCAGCCTCATCGCTTAG
TAGCTGATGTCCTTGAGTAAATTACTTGATTTTGCGCCTTGATTTCCTAATCTACAAAAT
GTCAGTTATAGTACCTATTCATTGGGTTATGTGGTTTAAGGCTTGGGTGATTGAGGAAAG
TTAAATAGAATAGTTGGCATTGGAGAGAATCTTAAAAGTGTATTATGGATATTGGAGTGG
CGAAGGCCAATCCAAGAGTGATAAACTTGAGTGTGTATTAAACACTGCATGTCTTCAGAA
TTTAAGTTGTTGATGCTGATTTGCACTGCGATTTTCTTGTGGGCCCTCTTGCAGCACACC
GACAAAAAGCAGGAGTATTTGAAATTATCTAGAAGGGAGATTTTCTGTAAAAAGTTTTTT
TTTTTATTCTGTAAAAAGTTTAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTCAATTAGACATTGAATTTCAGCTCAGTATCTATTACAAGGAATTATTAATAAAGTT
GTTTATTGACAACATAAATCCAAGGCTCTAACATGTCTTGTTAACTTTCAGCCCCTGGGA
GATGTGGGAAATAAGGTTTCTTAATATAAACATTATTACTTATTTGAGTGACTTCATATC
CAAGGAGTATGGCCACTGGGACCAGACTGTCCAAATCCCAATCTCAGCCTCATCGCTTAG
TAGCTGATGTCCTTGAGTAAATTACTTGATTTTGCGCCTTGATTTCCTAATCTACAAAAT
GTCAGTTATAGTACCTATTCATTGGGTTATGTGGTTTAAGGCTTGGGTGATTGAGGAAAG
TTAAATAGAATAGTTGGCATTGGAGAGAATCTTAAAAGTGTATTATGGATATTGGAGTGG
CGAAGGCCAATCCAAGAGTGATAAACTTGAGTGTGTATTAAACACTGCATGTCTTCAGAA
TTTAAGTTGTTGATGCTGATTTGCACTGCGATTTTCTTGTGGGCCCTCTTGCAGCACACC
GACAAAAAGCAGGAGTATTTGAAATTATCTAGAAGGGAGATTTTCTGTAAAAAGTTTTTT
TTTTTATTCTGTAAAAAGTTTAGT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-564, gnl|bosTau2|chr2 (38536938-38536357)
               

               
               1-564, gnl|Hg17|chr2 (135550577-135551845)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-564, gnl|bosTau2|chr2 (38536938-38536357)
               

               
               1-564, gnl|Hg17|chr2 (135550577-135551845)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               pro (0.512033)
               

               
               gul (0.177588)
               

               
               liv (0.146284)
               

               
               ova (0.129132)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               gul (0.177588)
               

               
               liv (0.146284)
               

               
               ova (0.129132)

	1-564, gnl\|bosTau2\|chr2 (38536938-38536357)
	1-564, gnl\|Hg17\|chr2 (135550577-135551845)