Non-Coding RNA Search

Ss1.1-rpro31_b15.5

Sequence:


               
               TGCTCCCGGCATCAGAGCCTCTGGCTTATCAAAGAGGCAGCCAGGCACTTTGCACTAGGA
GGAATCAGTGATCACTTTTCAGAAGACTTCTATGGACCATAAATATATTACTGAGGAACA
GATTTTGCTAAGACAAGAGTCTAGTTTTATAACTCAATCATGGAGCAACCATATGTGGCT
AACTTGCAGTTAAAAGGGGTCCCATCAGTGAAAATCAGATTTTTTTTTTTTTGGCTGACC
GCTTTCAGCTAAATTCAAGACCGTCGTCTCTTGTCAAAAGGTTTACACCTTCCCGCCTTG
ATCTTAAAAGCATGTCAGACGATCCACATGAGATGCCATAAATGAACTGCAAGAGAAAAT
GGTACAATCTTAGTGAACGGGAGTTGGAATCAAAAGGTTTGCTGTCCTTCTTAGAATGTT
CTAGAATGTCGAGGCAGTTGCTTGTGTTAACTGTGAACAAATAAAAACTTATTGTTTTGC
ACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTCCCGGCATCAGAGCCTCTGGCTTATCAAAGAGGCAGCCAGGCACTTTGCACTAGGA
GGAATCAGTGATCACTTTTCAGAAGACTTCTATGGACCATAAATATATTACTGAGGAACA
GATTTTGCTAAGACAAGAGTCTAGTTTTATAACTCAATCATGGAGCAACCATATGTGGCT
AACTTGCAGTTAAAAGGGGTCCCATCAGTGAAAATCAGATTTTTTTTTTTTTGGCTGACC
GCTTTCAGCTAAATTCAAGACCGTCGTCTCTTGTCAAAAGGTTTACACCTTCCCGCCTTG
ATCTTAAAAGCATGTCAGACGATCCACATGAGATGCCATAAATGAACTGCAAGAGAAAAT
GGTACAATCTTAGTGAACGGGAGTTGGAATCAAAAGGTTTGCTGTCCTTCTTAGAATGTT
CTAGAATGTCGAGGCAGTTGCTTGTGTTAACTGTGAACAAATAAAAACTTATTGTTTTGC
ACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-484, gnl|bosTau2|chr11 (83483535-83483046)
               

               
               1-484, gnl|Hg17|chr9 (132796772-132796290)
               

               
               1-484, gnl|Mm7|chr2 (28698010-28698481)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-484, gnl|bosTau2|chr11 (83483535-83483046)
               

               
               1-484, gnl|Hg17|chr9 (132796772-132796290)
               

               
               1-484, gnl|Mm7|chr2 (28698010-28698481)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               pro (0.512033)
               

               
               ova (0.258264)
               

               
               gul (0.177588)
               

               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               spc (0.113366)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               ova (0.258264)
               

               
               gul (0.177588)
               

               
               lyg (0.133103)
               

               
               kid (0.129735)
               

               
               spc (0.113366)

	1-484, gnl\|bosTau2\|chr11 (83483535-83483046)
	1-484, gnl\|Hg17\|chr9 (132796772-132796290)
	1-484, gnl\|Mm7\|chr2 (28698010-28698481)

	pro (0.512033)
	ova (0.258264)
	gul (0.177588)
	lyg (0.133103)
	kid (0.129735)
	spc (0.113366)