Non-Coding RNA Search

Ss1.1-rpro32_d9.5

Sequence:


               
               AAATAGCAAGTGACTGGAGTTCCCACTGGGCGCAACAGGTTGAGGATCCAGCATTGTCTC
TGTGGTGGTTCCATCCCCCCCGCCCAGGGCAGTGGGTTAAGGATCCATTGTTGCTGCAAG
CTGTGGCCTGGATTTGATCCTTGGCCCAAGTACTTAAATATGCTGTGATTGCAGCTAGAA
AAGGGGGGGAAAAAAAAGAAAAATACCAAGTGACCAAATTAGATAACTTGTGTCCTGGCT
GTAGAAAAAAGTTTTGGGATTAGTTGAAGTGTCATTGCCGCTGGAACAAAAAGTTTCCTT
CTCTGCACTAGATATTTTATTTTACTTGGATTTTCTCTGGGCAATACGTAAAGTAAATAA
ATTCTTAAAATTGAGCCTTAGGTCAAACAAAGACAATCTAATGACATTCTCAGGGAAACC
ATAAAAATTGGGCTAAGCTAATATGTTCAGTAGTCTTCTGGGTAACACTTTAAAATAATT
GTATTTTTATTTCAAAAATAATGTGTCCAGTGTGGAACCTTTGCAAAATACAGAAAAGAA
CAAATAAGAAAGTTCAATTATGAGCTAATTTTAAATACTTAAGGCAGATTTCTTGTAAAT
TATTATGACTAATAGGGAGATAGCTGTAGTTAAAACTACTTTTAGATTATTAGTATCTGC
TGTAAGAGGGGAGATTTTATTCTTAAATATTATTTGTGTACATTCTGTAGTATTTTTCAT
CCCAGAAAGAACTTTGTTGTAATTCTAGACACAGAGGGGCAGATTTAGATCTTGAAAATT
ACTTGTGGTACTTACTGAATGCTTGCAGTATGACTTAGGGCCATCCGCTGTAAATATTTG
AAGCCACAAAATTTCCCTTTGTTTCTCATGTCACCTACTTTTGTTTAATTGGGATTTGAT
AAGTTGTTTTACGAAGTAGTTTCTAGTATGTTAAGATTATCCTTTTCTCCTGGTATGTGT
ATGATAAATTTCAGTAGAAGCTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATAGCAAGTGACTGGAGTTCCCACTGGGCGCAACAGGTTGAGGATCCAGCATTGTCTC
TGTGGTGGTTCCATCCCCCCCGCCCAGGGCAGTGGGTTAAGGATCCATTGTTGCTGCAAG
CTGTGGCCTGGATTTGATCCTTGGCCCAAGTACTTAAATATGCTGTGATTGCAGCTAGAA
AAGGGGGGGAAAAAAAAGAAAAATACCAAGTGACCAAATTAGATAACTTGTGTCCTGGCT
GTAGAAAAAAGTTTTGGGATTAGTTGAAGTGTCATTGCCGCTGGAACAAAAAGTTTCCTT
CTCTGCACTAGATATTTTATTTTACTTGGATTTTCTCTGGGCAATACGTAAAGTAAATAA
ATTCTTAAAATTGAGCCTTAGGTCAAACAAAGACAATCTAATGACATTCTCAGGGAAACC
ATAAAAATTGGGCTAAGCTAATATGTTCAGTAGTCTTCTGGGTAACACTTTAAAATAATT
GTATTTTTATTTCAAAAATAATGTGTCCAGTGTGGAACCTTTGCAAAATACAGAAAAGAA
CAAATAAGAAAGTTCAATTATGAGCTAATTTTAAATACTTAAGGCAGATTTCTTGTAAAT
TATTATGACTAATAGGGAGATAGCTGTAGTTAAAACTACTTTTAGATTATTAGTATCTGC
TGTAAGAGGGGAGATTTTATTCTTAAATATTATTTGTGTACATTCTGTAGTATTTTTCAT
CCCAGAAAGAACTTTGTTGTAATTCTAGACACAGAGGGGCAGATTTAGATCTTGAAAATT
ACTTGTGGTACTTACTGAATGCTTGCAGTATGACTTAGGGCCATCCGCTGTAAATATTTG
AAGCCACAAAATTTCCCTTTGTTTCTCATGTCACCTACTTTTGTTTAATTGGGATTTGAT
AAGTTGTTTTACGAAGTAGTTTCTAGTATGTTAAGATTATCCTTTTCTCCTGGTATGTGT
ATGATAAATTTCAGTAGAAGCTAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               201-902, gnl|bosTau2|chr21 (29509702-29509006)
               

               
               201-902, gnl|Hg17|chr14 (34241055-34239742)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               201-902, gnl|bosTau2|chr21 (29509702-29509006)
               

               
               201-902, gnl|Hg17|chr14 (34241055-34239742)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               pro (0.512033)
               

               
               fco (0.314416)
               

               
               che (0.272628)
               

               
               tbr (0.154178)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               fco (0.314416)
               

               
               che (0.272628)
               

               
               tbr (0.154178)

	201-902, gnl\|bosTau2\|chr21 (29509702-29509006)
	201-902, gnl\|Hg17\|chr14 (34241055-34239742)