Non-Coding RNA Search

Ss1.1-rpro32_g9.5

Sequence:


               
               GGATTCCTTCTCCAGTGTGCCACAGTTGCCACACTCCTCCAGAGCTCCTCCTGTCATGCC
CAGCTCATCCATACACCATCCTGGCTCTCGGGCTCCGGAAGTGGGAGGCATGAAGCAGGC
CCACGCCCTTTCCTCCCAGCCGTGTTCTCCTCTTCCGCTTTCCAGGGAAGCTCCATTTGA
CGTGGGCAGTGTCAACTTCCTTTCCTCTTTCCCCCTTTCCAGCTGCCGAATTCAATTCAT
TCTCTAACCTAGATGAAGATCATTTATTTAAAAGTACCAAACATAACCTAGAATATATGA
AATATGGGCAACACATATATAACCTTCTGTATTTAATGGTTTTCTGCTTTCTAACCATAC
TGGTTTTCTATTTATAACCCTAGTTTATTCATGATATTTTAAAGAAATCTCTACTTGCTG
TTATTTACAAACGACAGTGGCCGGATGCCTTGAGAGGTGCCACATTTCTGAGTCCTTCAT
CTGGATGTCATGCTCTCCTCCTAAAGCCTGTGTCCGAGTGAACATATCCATTAACCAGCT
AGTTACCTTTGAACTGCAAGATAGAATGTGAAAATGAAGATTTATTTCTTTTAATTTACT
TAAAAGAAACCTCTGTGCTAGCAATAAAGCATTTATATTGTGTAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATTCCTTCTCCAGTGTGCCACAGTTGCCACACTCCTCCAGAGCTCCTCCTGTCATGCC
CAGCTCATCCATACACCATCCTGGCTCTCGGGCTCCGGAAGTGGGAGGCATGAAGCAGGC
CCACGCCCTTTCCTCCCAGCCGTGTTCTCCTCTTCCGCTTTCCAGGGAAGCTCCATTTGA
CGTGGGCAGTGTCAACTTCCTTTCCTCTTTCCCCCTTTCCAGCTGCCGAATTCAATTCAT
TCTCTAACCTAGATGAAGATCATTTATTTAAAAGTACCAAACATAACCTAGAATATATGA
AATATGGGCAACACATATATAACCTTCTGTATTTAATGGTTTTCTGCTTTCTAACCATAC
TGGTTTTCTATTTATAACCCTAGTTTATTCATGATATTTTAAAGAAATCTCTACTTGCTG
TTATTTACAAACGACAGTGGCCGGATGCCTTGAGAGGTGCCACATTTCTGAGTCCTTCAT
CTGGATGTCATGCTCTCCTCCTAAAGCCTGTGTCCGAGTGAACATATCCATTAACCAGCT
AGTTACCTTTGAACTGCAAGATAGAATGTGAAAATGAAGATTTATTTCTTTTAATTTACT
TAAAAGAAACCTCTGTGCTAGCAATAAAGCATTTATATTGTGTAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-644, gnl|bosTau2|chr10 (34352450-34353087)
               

               
               11-644, gnl|Hg17|chr15 (56033574-56032919)
               

               
               11-644, gnl|Mm7|chr9 (71329996-71330618)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-644, gnl|bosTau2|chr10 (34352450-34353087)
               

               
               11-644, gnl|Hg17|chr15 (56033574-56032919)
               

               
               11-644, gnl|Mm7|chr9 (71329996-71330618)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               rec (0.865351)
               

               
               sag (0.730861)
               

               
               pro (0.512033)
               

               
               ova (0.258264)
               

               
               sug (0.254582)
               

               
               tes (0.207814)
               

               
               spc (0.113366)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.865351)
               

               
               sag (0.730861)
               

               
               pro (0.512033)
               

               
               ova (0.258264)
               

               
               sug (0.254582)
               

               
               tes (0.207814)
               

               
               spc (0.113366)

	11-644, gnl\|bosTau2\|chr10 (34352450-34353087)
	11-644, gnl\|Hg17\|chr15 (56033574-56032919)
	11-644, gnl\|Mm7\|chr9 (71329996-71330618)

	rec (0.865351)
	sag (0.730861)
	pro (0.512033)
	ova (0.258264)
	sug (0.254582)
	tes (0.207814)
	spc (0.113366)