Non-Coding RNA Search

Ss1.1-rpro33_a22.5

Sequence:


               
               CTCGTGCCGGCATCACCCTGTCCCCCCAGATCCTCCTTTTCACCCCATGAACCCACCCTG
CAGGGAGACCTTTGTTTCCCTTCTCACAGCTTAACTTGCTGCCAGTGTTGCAATAGCTAA
GAATGCTTGTAAATACTGTAATATAGTGATTAATATTCGAAAGGCATTCATTCCAGTGGA
CAGTGAGAATTAACTCTCCCAAGGCGAGTAAATGTTAAACCAAGTAATTGATTTGTACAT
CGATTTAGCAGTCTTACTAGATTTTAAGTCTTAAGCCTTTCAGATTAAACTAGAAGGTTG
TTATGGAGTTTTTAATGATCTTACATTTGATGAGATCCCATGAACTCATATGCTCACCCC
ATGTAATTAGCACCATGAACTCATAATGGGAATTTTTCAAGGCTTTTATTTTTTTAACTG
TATTAATAAACTAAGTCTGGATTTTAGGTGTCACACAGGACACATGAAAATTTCAAACCA
CGTTGCTATTTGCAAAAGCAAAATAGCAGGCAGTTTTGTACATGCAAACTGTTGAAGGGC
CATGAAGAAATGTGTACACTGCGACCTGGCTTCCTGTGTGTATAAAAGTCGAGGTATTGC
TGGCATTCAGCGTGACATGACGGTACTAAACATTTTCCATTAAAGTCTTTTATTTTGAAA
TTTATCTGGGGGAAAAATAAATGACTTTCCATCATGAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCGTGCCGGCATCACCCTGTCCCCCCAGATCCTCCTTTTCACCCCATGAACCCACCCTG
CAGGGAGACCTTTGTTTCCCTTCTCACAGCTTAACTTGCTGCCAGTGTTGCAATAGCTAA
GAATGCTTGTAAATACTGTAATATAGTGATTAATATTCGAAAGGCATTCATTCCAGTGGA
CAGTGAGAATTAACTCTCCCAAGGCGAGTAAATGTTAAACCAAGTAATTGATTTGTACAT
CGATTTAGCAGTCTTACTAGATTTTAAGTCTTAAGCCTTTCAGATTAAACTAGAAGGTTG
TTATGGAGTTTTTAATGATCTTACATTTGATGAGATCCCATGAACTCATATGCTCACCCC
ATGTAATTAGCACCATGAACTCATAATGGGAATTTTTCAAGGCTTTTATTTTTTTAACTG
TATTAATAAACTAAGTCTGGATTTTAGGTGTCACACAGGACACATGAAAATTTCAAACCA
CGTTGCTATTTGCAAAAGCAAAATAGCAGGCAGTTTTGTACATGCAAACTGTTGAAGGGC
CATGAAGAAATGTGTACACTGCGACCTGGCTTCCTGTGTGTATAAAAGTCGAGGTATTGC
TGGCATTCAGCGTGACATGACGGTACTAAACATTTTCCATTAAAGTCTTTTATTTTGAAA
TTTATCTGGGGGAAAAATAAATGACTTTCCATCATGAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               29-695, gnl|bosTau2|chr24 (29148570-29149209)
               

               
               29-695, gnl|Hg17|chr18 (12437197-12436512)
               

               
               29-695, gnl|Mm7|chr18 (67881259-67880506)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-695, gnl|bosTau2|chr24 (29148570-29149209)
               

               
               29-695, gnl|Hg17|chr18 (12437197-12436512)
               

               
               29-695, gnl|Mm7|chr18 (67881259-67880506)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pro (0.512033)
               

               
               cbe (0.239234)
               

               
               pgl (0.118483)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               cbe (0.239234)
               

               
               pgl (0.118483)

	29-695, gnl\|bosTau2\|chr24 (29148570-29149209)
	29-695, gnl\|Hg17\|chr18 (12437197-12436512)
	29-695, gnl\|Mm7\|chr18 (67881259-67880506)