Non-Coding RNA Search

Ss1.1-rpro33_h20.5

Sequence:


               
               GCACCATAACAGGAACTTGCCTGTGCCTGTATTCTTGATAGTCCATCAGTAATATCATGT
TTTCATTTCAATGATGATCTTTAAAAAACTTACATAATAAAATATAAGCTTATCTGGGAT
GTTCATTTTATAAGACATACTTTTAGTGTAGGTATTTTATGCTGAAAATTGTGTTGGTAT
CACCTGGTTGTTAATGTGGCAGTATTTAACTTTTAAAGTGTTGGGACTTTAGATTGGCAT
TCCTGACATCAAGAAACAAAATGCATCTTGATTTCTGTTTGATAAACATTATATCAAGTT
ATCTGACAAATTACAAGGGTAAAACTGCTTTTCCAGTGATGAGATTTATGTCTTAATTTA
TTTAATAAATTAATTTTGACTTTCCATCAATTTTGACTTTCCATCATAAAAATAACCATG
CTGCTTTAATTGCCACAGGCTAATGAGAAAAGAACCGGGCTGGCTGACTTAATACACAAA
TGATGCATTCATGCAAAGTGAAGGCCAAATGAATCATGGCACCAGAATAAATGAAGCCTT
ATAGTAGTTCAAATACAGGAAAGCGGAGAGAAAATTGAGTCATTACAGGTCTCTTGGTAC
CATAGGTTGAACTGAAAGGAAGCTAGGCGGAGCAGTCACTTTATTCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACCATAACAGGAACTTGCCTGTGCCTGTATTCTTGATAGTCCATCAGTAATATCATGT
TTTCATTTCAATGATGATCTTTAAAAAACTTACATAATAAAATATAAGCTTATCTGGGAT
GTTCATTTTATAAGACATACTTTTAGTGTAGGTATTTTATGCTGAAAATTGTGTTGGTAT
CACCTGGTTGTTAATGTGGCAGTATTTAACTTTTAAAGTGTTGGGACTTTAGATTGGCAT
TCCTGACATCAAGAAACAAAATGCATCTTGATTTCTGTTTGATAAACATTATATCAAGTT
ATCTGACAAATTACAAGGGTAAAACTGCTTTTCCAGTGATGAGATTTATGTCTTAATTTA
TTTAATAAATTAATTTTGACTTTCCATCAATTTTGACTTTCCATCATAAAAATAACCATG
CTGCTTTAATTGCCACAGGCTAATGAGAAAAGAACCGGGCTGGCTGACTTAATACACAAA
TGATGCATTCATGCAAAGTGAAGGCCAAATGAATCATGGCACCAGAATAAATGAAGCCTT
ATAGTAGTTCAAATACAGGAAAGCGGAGAGAAAATTGAGTCATTACAGGTCTCTTGGTAC
CATAGGTTGAACTGAAAGGAAGCTAGGCGGAGCAGTCACTTTATTCGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               21-648, gnl|bosTau2|chr9 (20001295-20000686)
               

               
               21-648, gnl|Hg17|chr6 (111974300-111974938)
               

               
               21-648, gnl|Mm7|chr10 (39449107-39448295)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-648, gnl|bosTau2|chr9 (20001295-20000686)
               

               
               21-648, gnl|Hg17|chr6 (111974300-111974938)
               

               
               21-648, gnl|Mm7|chr10 (39449107-39448295)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

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               pro (0.512033)
               

               
               nco (0.161734)
               

               
               fat (0.147427)
               

               
               hyp (0.142837)
               

               
               cov (0.132153)
               

               
               sug (0.127291)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               nco (0.161734)
               

               
               fat (0.147427)
               

               
               hyp (0.142837)
               

               
               cov (0.132153)
               

               
               sug (0.127291)

	21-648, gnl\|bosTau2\|chr9 (20001295-20000686)
	21-648, gnl\|Hg17\|chr6 (111974300-111974938)
	21-648, gnl\|Mm7\|chr10 (39449107-39448295)

	pro (0.512033)
	nco (0.161734)
	fat (0.147427)
	hyp (0.142837)
	cov (0.132153)
	sug (0.127291)