Non-Coding RNA Search

Ss1.1-rpro36_c11.5

Sequence:


               
               GGACTGCTTCTGCAGTGTGTGGAAATTTCCCAGCCA------------------------
------------------------------------------------------------
------------------------TCCCTGCATTTCTTCCATGTGCATTTAAATTATAAA
CAGCCTATCATTACTCGTGCCCCTTTATTAGTTAACAAACCAGGCTGTGTTAAAAAAGAA
AAAAAAAAAAAACCTTTTTGGTTCTATGAGATTATAGCTAAACTTCAAATTATATATTTT
ATTTAAAAATAAAAAACTGAAAAAATTTTAAGCCATTATTATAATGACTGAAATAGTAAA
TTGTTACTATTTCAGAAGTTAAATAGTGCTCGTTGCCCTTGTTATGTTTAGGTTACCCGT
TTGGACTGCAAATTATTTATTGTAGTTTACTGTTATAAATAATATCTACCAGAATAATTG
GCAACCTAAACAGAGAGAGTAGATTACTTATTTTCATAGGCTGGCCATTGAATCCCCTGT
TCTTTCACAGTGCAGTTTCAATGAACATTTTGATCATTTCAGATTAGACAAGTCTGCTTT
GTTCTATTTTGTTATAAGGTATTTTGATGTGCCTTCCTCGTGTTACCCATCCTTAAGCCT
ATTGGATTTTTGACTAGTGTTTATACAACTTTTTTCTTTTTTCAGTAGGAAGAGGGATTA
TACTGAATACTAGCCCATTCTGCAGAGTCATAGAGCTGCCTTTTTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACTGCTTCTGCAGTGTGTGGAAATTTCCCAGCCA------------------------
------------------------------------------------------------
------------------------TCCCTGCATTTCTTCCATGTGCATTTAAATTATAAA
CAGCCTATCATTACTCGTGCCCCTTTATTAGTTAACAAACCAGGCTGTGTTAAAAAAGAA
AAAAAAAAAAAACCTTTTTGGTTCTATGAGATTATAGCTAAACTTCAAATTATATATTTT
ATTTAAAAATAAAAAACTGAAAAAATTTTAAGCCATTATTATAATGACTGAAATAGTAAA
TTGTTACTATTTCAGAAGTTAAATAGTGCTCGTTGCCCTTGTTATGTTTAGGTTACCCGT
TTGGACTGCAAATTATTTATTGTAGTTTACTGTTATAAATAATATCTACCAGAATAATTG
GCAACCTAAACAGAGAGAGTAGATTACTTATTTTCATAGGCTGGCCATTGAATCCCCTGT
TCTTTCACAGTGCAGTTTCAATGAACATTTTGATCATTTCAGATTAGACAAGTCTGCTTT
GTTCTATTTTGTTATAAGGTATTTTGATGTGCCTTCCTCGTGTTACCCATCCTTAAGCCT
ATTGGATTTTTGACTAGTGTTTATACAACTTTTTTCTTTTTTCAGTAGGAAGAGGGATTA
TACTGAATACTAGCCCATTCTGCAGAGTCATAGAGCTGCCTTTTTTCC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               37-658, gnl|bosTau2|chr19 (37807291-37807890)
               

               
               37-658, gnl|Hg17|chr17 (39901738-39900584)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               37-658, gnl|bosTau2|chr19 (37807291-37807890)
               

               
               37-658, gnl|Hg17|chr17 (39901738-39900584)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pro (0.512033)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)

	37-658, gnl\|bosTau2\|chr19 (37807291-37807890)
	37-658, gnl\|Hg17\|chr17 (39901738-39900584)