Non-Coding RNA Search

Ss1.1-rpro37_a20.5

Sequence:


               
               GCCTGCTTTTTTCAAAAATTCAGAGAATGCCAGTTCTTCAATGATGAAAAATGAAAAACA
AAGGGTGAATGAGAGAGAGAAGCCAGGATTTACAGTATCATACTCTCCAAAAAGAAGCAC
AAACCCCAGCCAAGAGCCAGCTCCAGATATGAAGCCAAACTGGGCCAGGGACAGATATCC
TGCCACAAAGAGAGGCCGCACGGCCACAACGGTATGCCCGTCCTTGCACATATACACCTA
CCCCTAAGGTGTCTGGGCCATGCCACACAGGCGATTCCCTGCTGTGTTTTGGGTTAGACA
CGCTGTGTAACAAAGGGAGTTGGATGCTAGGGAACTGTGTTCGTTCGTGGTATTCTATGT
TGTGTGTTCATCATGCACTGTCCTCACGCTATGTGCATGCTCTCAAGATGCATTATTTGT
TCGTGCAAATTATTTTTTCATAAAGTGAAATTTTATTGTGATGTATCCAAAACCTTCCCT
TATCAGAAATTGAAGTGCGCTCATGAAATTACAACACAGACACACCTCAGTTTAACCAAT
AGATATTCTCTCTAAAATTATGTGCAAGTCAATTTTAAAAGAGCAGATTCTATTTTAAAC
ATACTGTGGTAGTTTGCTAAATTAAAAGGTCTTGCCTCAAAGCTCTTTAGCTTTGCTCAG
GGTGTGGTGTTCTCATATGTATATCCTGGAGGTCAGTGTTCCATCTATTATGTTCAACAC
AGTATGTAAGTTTTGTAACCCACTGATTAAAATTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTGCTTTTTTCAAAAATTCAGAGAATGCCAGTTCTTCAATGATGAAAAATGAAAAACA
AAGGGTGAATGAGAGAGAGAAGCCAGGATTTACAGTATCATACTCTCCAAAAAGAAGCAC
AAACCCCAGCCAAGAGCCAGCTCCAGATATGAAGCCAAACTGGGCCAGGGACAGATATCC
TGCCACAAAGAGAGGCCGCACGGCCACAACGGTATGCCCGTCCTTGCACATATACACCTA
CCCCTAAGGTGTCTGGGCCATGCCACACAGGCGATTCCCTGCTGTGTTTTGGGTTAGACA
CGCTGTGTAACAAAGGGAGTTGGATGCTAGGGAACTGTGTTCGTTCGTGGTATTCTATGT
TGTGTGTTCATCATGCACTGTCCTCACGCTATGTGCATGCTCTCAAGATGCATTATTTGT
TCGTGCAAATTATTTTTTCATAAAGTGAAATTTTATTGTGATGTATCCAAAACCTTCCCT
TATCAGAAATTGAAGTGCGCTCATGAAATTACAACACAGACACACCTCAGTTTAACCAAT
AGATATTCTCTCTAAAATTATGTGCAAGTCAATTTTAAAAGAGCAGATTCTATTTTAAAC
ATACTGTGGTAGTTTGCTAAATTAAAAGGTCTTGCCTCAAAGCTCTTTAGCTTTGCTCAG
GGTGTGGTGTTCTCATATGTATATCCTGGAGGTCAGTGTTCCATCTATTATGTTCAACAC
AGTATGTAAGTTTTGTAACCCACTGATTAAAATTCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               72-651, gnl|bosTau2|chr15 (48694018-48694606)
               

               
               72-651, gnl|Hg17|chr11 (47638476-47637880)
               

               
               72-651, gnl|Mm7|chr2 (90666054-90666774)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-651, gnl|bosTau2|chr15 (48694018-48694606)
               

               
               72-651, gnl|Hg17|chr11 (47638476-47637880)
               

               
               72-651, gnl|Mm7|chr2 (90666054-90666774)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pro (1.02407)
               

               
               tes (0.207814)
               

               
               gul (0.177588)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (1.02407)
               

               
               tes (0.207814)
               

               
               gul (0.177588)

	72-651, gnl\|bosTau2\|chr15 (48694018-48694606)
	72-651, gnl\|Hg17\|chr11 (47638476-47637880)
	72-651, gnl\|Mm7\|chr2 (90666054-90666774)