Non-Coding RNA Search

Ss1.1-rpro40_c6.5

Sequence:


               
               AAAAAGGAAATTGGCTATAGTTCCCAAGTTGTCCTTTCTTCCATGGTTTTATTCTCTTGG
CTTGATGTTCCCATTGGTTTTTTGTGTTTCTATTAGACTAACGTAAAAAATTTCAAGCAA
GCTTTAAGTGAAATTTTTTTCTCTTATGTAGCCTGTTAGTGGTTAATAATCTAAGAATGT
TGTATTCATTTCAACATTCTGTTTATTTGGTGAGTCTTTCAGTTCTGCTTAGGCAACATG
TTCACACCTAAGCCATAAGATAAAAGTATCCTGGGTTGTACCAGCTCTGCTCCCTGTGAA
AGAGTAGATAAAGTCCAAGGAGTTCTTACTAGCTTGGAAACGGACTGATAGCTAGAAAAA
GCTTTTGGCTCTATCTTAGTTGCGAAATAAGCATTTTTTCTTCTTTGTTGGAAGCAATAG
AAATATGATCCTTGAACTCAAATAATCATTCTTCAGAATGTTAAATAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAGGAAATTGGCTATAGTTCCCAAGTTGTCCTTTCTTCCATGGTTTTATTCTCTTGG
CTTGATGTTCCCATTGGTTTTTTGTGTTTCTATTAGACTAACGTAAAAAATTTCAAGCAA
GCTTTAAGTGAAATTTTTTTCTCTTATGTAGCCTGTTAGTGGTTAATAATCTAAGAATGT
TGTATTCATTTCAACATTCTGTTTATTTGGTGAGTCTTTCAGTTCTGCTTAGGCAACATG
TTCACACCTAAGCCATAAGATAAAAGTATCCTGGGTTGTACCAGCTCTGCTCCCTGTGAA
AGAGTAGATAAAGTCCAAGGAGTTCTTACTAGCTTGGAAACGGACTGATAGCTAGAAAAA
GCTTTTGGCTCTATCTTAGTTGCGAAATAAGCATTTTTTCTTCTTTGTTGGAAGCAATAG
AAATATGATCCTTGAACTCAAATAATCATTCTTCAGAATGTTAAATAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               39-468, gnl|bosTau2|chr2 (13732973-13732543)
               

               
               39-468, gnl|Hg17|chr2 (172163733-172164162)
               

               
               39-468, gnl|Mm7|chr2 (70934767-70935139)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-468, gnl|bosTau2|chr2 (13732973-13732543)
               

               
               39-468, gnl|Hg17|chr2 (172163733-172164162)
               

               
               39-468, gnl|Mm7|chr2 (70934767-70935139)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pro (0.512033)
               

               
               ova (0.129132)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               ova (0.129132)

	39-468, gnl\|bosTau2\|chr2 (13732973-13732543)
	39-468, gnl\|Hg17\|chr2 (172163733-172164162)
	39-468, gnl\|Mm7\|chr2 (70934767-70935139)