Non-Coding RNA Search

Ss1.1-rpro40_e18.5

Sequence:


               
               ACCAAGAGGCCAGAAGGCAGAACTTATGCTGACTATGAATCTGTAAATGAATGCATGGAA
AGTGTTTGTAAAATGTATGAAGAACATCTGAAGAGAATGAATCCCAACAGCCCCTCTATC
ACATATGATATCAGTCAGTTGTTTGATTTTATCGATGATCTGGCAGACCTCATCTGCCTT
GTTTACCGAGCTGATACCCATACATACCAGCCTTACAACAAAGACTGGATTAAAGAGAAG
ATCTACGTGCTCCTTCGTCGGCAGGCCCAGCAGGCCGGGAAATAGTTGAGTTTGGAAGCG
TTGGGGGGGCGGGGGTGGGCTTGGAACACAGGCGTGTACAGCGTGCTGTAGCGGAAGACT
TGTATGATAGTAGTCCTGTTTCCATTTGGTACACTCTAGCCAAGGTCGAATGTATTAGAT
GAAATGTGAGGGTTTTGTTCAATATGAAACCCCCATTGCTCCCCCTCCCCCCCCCCCCTT
TTTTTTTACTTAAACATTTTTATGATGCTTTAGACGGAAGTTGGTTTTTGTCAGTTAGCA
TTGGTTCCAGTCCTTCAAACTGTTCGTATCTGCTTTATAACATTCACTGTACTAACCCTT
CAGATCAGGGTGGGGGTGGTGGCACAGTTATGTCCTAAAGATGAAGTCTTAGGTGAAAAA
CAAAAAACAAATAAATGTTCTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCAAGAGGCCAGAAGGCAGAACTTATGCTGACTATGAATCTGTAAATGAATGCATGGAA
AGTGTTTGTAAAATGTATGAAGAACATCTGAAGAGAATGAATCCCAACAGCCCCTCTATC
ACATATGATATCAGTCAGTTGTTTGATTTTATCGATGATCTGGCAGACCTCATCTGCCTT
GTTTACCGAGCTGATACCCATACATACCAGCCTTACAACAAAGACTGGATTAAAGAGAAG
ATCTACGTGCTCCTTCGTCGGCAGGCCCAGCAGGCCGGGAAATAGTTGAGTTTGGAAGCG
TTGGGGGGGCGGGGGTGGGCTTGGAACACAGGCGTGTACAGCGTGCTGTAGCGGAAGACT
TGTATGATAGTAGTCCTGTTTCCATTTGGTACACTCTAGCCAAGGTCGAATGTATTAGAT
GAAATGTGAGGGTTTTGTTCAATATGAAACCCCCATTGCTCCCCCTCCCCCCCCCCCCTT
TTTTTTTACTTAAACATTTTTATGATGCTTTAGACGGAAGTTGGTTTTTGTCAGTTAGCA
TTGGTTCCAGTCCTTCAAACTGTTCGTATCTGCTTTATAACATTCACTGTACTAACCCTT
CAGATCAGGGTGGGGGTGGTGGCACAGTTATGTCCTAAAGATGAAGTCTTAGGTGAAAAA
CAAAAAACAAATAAATGTTCTTTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|6679685|ref|NP_031977.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|6679685|ref|NP_031977.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               168-667, gnl|bosTau2|chr10 (55691941-55691441)
               

               
               168-667, gnl|Hg17|chr14 (68917124-68916614)
               

               
               168-667, gnl|Mm7|chr12 (78597327-78596835)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               168-667, gnl|bosTau2|chr10 (55691941-55691441)
               

               
               168-667, gnl|Hg17|chr14 (68917124-68916614)
               

               
               168-667, gnl|Mm7|chr12 (78597327-78596835)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pro (0.512033)
               

               
               fat (0.147427)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pro (0.512033)
               

               
               fat (0.147427)

	168-667, gnl\|bosTau2\|chr10 (55691941-55691441)
	168-667, gnl\|Hg17\|chr14 (68917124-68916614)
	168-667, gnl\|Mm7\|chr12 (78597327-78596835)