Non-Coding RNA Search

Ss1.1-rptbr0105_a1.5

Sequence:


               
               GATTATAGATTACCCTGAGGAAGCAGAGACTGTACAACCTTCAGTGCACCTGGAAGCAGC
ATTATTTGGGCCCCTTGTTTCCTGGGGATGCCTCCTATTCTCTAGCACTGTTGAGTAGAC
ACATTTTACCTGGCCCCTGCCAAGGAATTATATACCTTGATGCCTAACAGCCAGTAATAT
GTAACCTGCTGTAAGACTTACTGGGTCCAGTTAACAAACAGGGTATCTATCTGTTTTAAA
AGTGTATCCACAAATGTTCCCTTAAATGTGACTGTGCAAGATTTGGGATTTGCAGAAGTT
TTCAGGACCTCCAGACTTCTGTCCTATAACTAAGGGCACTGGCAGAGCAAATAATCTAAA
TGTTTTGTGGATTATTACAGGCTCTCTGCATTATTTATGTCAAAGCCATTGCTGTGTTGG
TAGGAAAATGGGGATTAAGAGAAGGCAGATCCTGTACACCACGGATAAGGCATTAGAGAC
ACAGCTAGCCATCTTTGCTGCCAACACATGAGGAGCAAGGTAGTAGTTAATATGAGGTTG
CCAAATCTTCAAGTTTTCTAAAATGAGTGGGAGATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTATAGATTACCCTGAGGAAGCAGAGACTGTACAACCTTCAGTGCACCTGGAAGCAGC
ATTATTTGGGCCCCTTGTTTCCTGGGGATGCCTCCTATTCTCTAGCACTGTTGAGTAGAC
ACATTTTACCTGGCCCCTGCCAAGGAATTATATACCTTGATGCCTAACAGCCAGTAATAT
GTAACCTGCTGTAAGACTTACTGGGTCCAGTTAACAAACAGGGTATCTATCTGTTTTAAA
AGTGTATCCACAAATGTTCCCTTAAATGTGACTGTGCAAGATTTGGGATTTGCAGAAGTT
TTCAGGACCTCCAGACTTCTGTCCTATAACTAAGGGCACTGGCAGAGCAAATAATCTAAA
TGTTTTGTGGATTATTACAGGCTCTCTGCATTATTTATGTCAAAGCCATTGCTGTGTTGG
TAGGAAAATGGGGATTAAGAGAAGGCAGATCCTGTACACCACGGATAAGGCATTAGAGAC
ACAGCTAGCCATCTTTGCTGCCAACACATGAGGAGCAAGGTAGTAGTTAATATGAGGTTG
CCAAATCTTCAAGTTTTCTAAAATGAGTGGGAGATC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-574, gnl|bosTau2|chr18 (40076517-40077094)
               

               
               1-574, gnl|Hg17|chr19 (40140006-40139383)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-574, gnl|bosTau2|chr18 (40076517-40077094)
               

               
               1-574, gnl|Hg17|chr19 (40140006-40139383)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mcp (0.170648)
               

               
               tbr (0.154178)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)
               

               
               tbr (0.154178)

	1-574, gnl\|bosTau2\|chr18 (40076517-40077094)
	1-574, gnl\|Hg17\|chr19 (40140006-40139383)