Non-Coding RNA Search

Ss1.1-rptbr0106_b18.5

Sequence:


               
               GAAAAATGGTAGCATTTTTTTCTAGCAAGATAAATTCTAAAAACGTTTTCCCTGATTTCA
TGAACAAGCATAGTTTTGGTAATCTTTTATAGAGATCCTCTAGTAATGTATTTTGGTCTC
AGTATTTCTTTTTCAAAGCCATTGTATATAAGAACAGCATTCCTTGAATATAAACAAAAA
CAACATAAGGAATGCCTAACATTTCAGCTCATACTTCTTAAAGAAGATATAGTATGTTGT
ATTCATCTCTTCTATAGAGCTTTCTTAAAAAATCCATTTACCCCACTATCAATTCATATT
TGAACTTAACAAAAACAAAGAGATTACGTATATACTTTTTAGATTCAGCAAAAGAATATG
AAATGATACATTTACTTTTCTTTTAGATGTATAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAAAATGGTAGCATTTTTTTCTAGCAAGATAAATTCTAAAAACGTTTTCCCTGATTTCA
TGAACAAGCATAGTTTTGGTAATCTTTTATAGAGATCCTCTAGTAATGTATTTTGGTCTC
AGTATTTCTTTTTCAAAGCCATTGTATATAAGAACAGCATTCCTTGAATATAAACAAAAA
CAACATAAGGAATGCCTAACATTTCAGCTCATACTTCTTAAAGAAGATATAGTATGTTGT
ATTCATCTCTTCTATAGAGCTTTCTTAAAAAATCCATTTACCCCACTATCAATTCATATT
TGAACTTAACAAAAACAAAGAGATTACGTATATACTTTTTAGATTCAGCAAAAGAATATG
AAATGATACATTTACTTTTCTTTTAGATGTATAGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-396, gnl|bosTau2|chr17 (18874592-18874984)
               

               
               1-396, gnl|Hg17|chr4 (129488975-129489374)
               

               
               1-396, gnl|Mm7|chr3 (40813644-40814029)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-396, gnl|bosTau2|chr17 (18874592-18874984)
               

               
               1-396, gnl|Hg17|chr4 (129488975-129489374)
               

               
               1-396, gnl|Mm7|chr3 (40813644-40814029)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tbr (0.308356)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.308356)

	1-396, gnl\|bosTau2\|chr17 (18874592-18874984)
	1-396, gnl\|Hg17\|chr4 (129488975-129489374)
	1-396, gnl\|Mm7\|chr3 (40813644-40814029)