Ss1.1-rptbr0110_e15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAATTAAAAGAAAAAGAAGCTGGGGTTGTAGCTCAAGCAAGATCTGTTCTTGCCTGGCA CAGTCGATACAAGTTCTGCCCAACCTGTGGAAGCGCAACTAAAATTGAAGAAGGTGGCTA TAAAAGAGTATGCTTAAAAGAAGACTGTCCTAGCCACCATGGTATTCACAATACATCATA CCCAAGAGTTGATCCAGTAGTAATCATGCAAGTTATTCATCCAGATGGGACCAAATGTCT TTTAGGCAGGCAGAAAAGATTTCCCCCTGGCATGTTTACCTGTCTTGCTGGATTTATTGA ACCTGGGGAGACAATAGAAGATGCTGTTCGGAGAGAAGTAGAAGAGGAAAGTGGAGTCAA AGTTGGCCATGTTCAGTATGTCTCTTGTCAACCATGGCCAATGCCCTCCTCCTTAATGAT TGGTTGCTTAGCTGTGGCAGTGTCTACAGAAATTAAAGTTGACAAGAATGAAATAGAGGA TGCCCGCTGGTTCACTAGAGAACAGGTTGTGGATGTTCTGACCAAAGGGAAGCAACAGGC ATTCTTTGTGCCACCAAGCCGAGCTATTGCACATCAATTAATCAAACACTGGATTGGAAT GAACCCCAATCTCTAAATCAGATAATTAAACTTTGACTATGTCTAATTGATTTCTAATCC CACTTATTCCTCAAGTGAGATTATAAATGTTTAGTGCTCTTTAGAATGTCACAACACAGA TACCATATTGGGTTTTTAAACTGTACCATCTATCTTAACTACAAAATTTATATTTTTATA AATTAAAACATTGCCTCAGATTTTGTAAAATCTGACCATTCTCTGAACATTTTTTTTCGT TGTGCTCCACAATTTTATCTCACAAAACCATATTTCTAATACGAGAAAGCATACTGTAAA GAAATATGTTCAAAAAAAAAAAAAAAAAACGTAAATCTAAACTCCAGCACCTCATGCAGG CATTAGACCATTCACTAAAATTCTTTTTTTTTTTTTTTTTTTTTGAAAATGAAATAAAAT ATTTTGCTGAATTTTGAGCTTGATTTTTGGTATTTTTGACATCATAAAGGTCCTTTTGGT TGTCAGTAGCTGATTTTTACTCATCTTCTCATTGTAATCCACTTTTTCTCCTTTTTCCAC TGTTCTATCAGTGCTCCGTTACAGTGTTGCTACTAATCTGTTTTGATC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAATTAAAAGAAAAAGAAGCTGGGGTTGTAGCTCAAGCAAGATCTGTTCTTGCCTGGCA CAGTCGATACAAGTTCTGCCCAACCTGTGGAAGCGCAACTAAAATTGAAGAAGGTGGCTA TAAAAGAGTATGCTTAAAAGAAGACTGTCCTAGCCACCATGGTATTCACAATACATCATA CCCAAGAGTTGATCCAGTAGTAATCATGCAAGTTATTCATCCAGATGGGACCAAATGTCT TTTAGGCAGGCAGAAAAGATTTCCCCCTGGCATGTTTACCTGTCTTGCTGGATTTATTGA ACCTGGGGAGACAATAGAAGATGCTGTTCGGAGAGAAGTAGAAGAGGAAAGTGGAGTCAA AGTTGGCCATGTTCAGTATGTCTCTTGTCAACCATGGCCAATGCCCTCCTCCTTAATGAT TGGTTGCTTAGCTGTGGCAGTGTCTACAGAAATTAAAGTTGACAAGAATGAAATAGAGGA TGCCCGCTGGTTCACTAGAGAACAGGTTGTGGATGTTCTGACCAAAGGGAAGCAACAGGC ATTCTTTGTGCCACCAAGCCGAGCTATTGCACATCAATTAATCAAACACTGGATTGGAAT GAACCCCAATCTCTAAATCAGATAATTAAACTTTGACTATGTCTAATTGATTTCTAATCC CACTTATTCCTCAAGTGAGATTATAAATGTTTAGTGCTCTTTAGAATGTCACAACACAGA TACCATATTGGGTTTTTAAACTGTACCATCTATCTTAACTACAAAATTTATATTTTTATA AATTAAAACATTGCCTCAGATTTTGTAAAATCTGACCATTCTCTGAACATTTTTTTTCGT TGTGCTCCACAATTTTATCTCACAAAACCATATTTCTAATACGAGAAAGCATACTGTAAA GAAATATGTTCAAAAAAAAAAAAAAAAAACGTAAATCTAAACTCCAGCACCTCATGCAGG CATTAGACCATTCACTAAAATTCTTTTTTTTTTTTTTTTTTTTTGAAAATGAAATAAAAT ATTTTGCTGAATTTTGAGCTTGATTTTTGGTATTTTTGACATCATAAAGGTCCTTTTGGT TGTCAGTAGCTGATTTTTACTCATCTTCTCATTGTAATCCACTTTTTCTCCTTTTTCCAC TGTTCTATCAGTGCTCCGTTACAGTGTTGCTACTAATCTGTTTTGATC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 23-191, gnl|bosTau2|chr27 (8995767-8995935) | |
| 23-191, gnl|Hg17|chr5 (102919699-102919531) | |
| 23-191, gnl|Mm7|chr17 (57213630-57213462) | |
| 305-507, gnl|bosTau2|chr27 (8998928-8999130) | |
| 305-507, gnl|canFam2|chr3 (10586949-10586720) | |
| 305-507, gnl|dasNov1|scaffold_6615 (34940-35169) | |
| 305-507, gnl|echTel1|scaffold_317054 (10016-10245) | |
| 305-507, gnl|fr1|chrUn (61053929-61053701) | |
| 305-507, gnl|galGal2|chrZ (22598237-22598465) | |
| 305-507, gnl|hg17|chr5 (102915816-102916045) | |
| 305-507, gnl|Hg17|chr5 (102916017-102915815) | |
| 305-507, gnl|mm7|chr17 (57209166-57209395) | |
| 305-507, gnl|Mm7|chr17 (57209367-57209165) | |
| 305-507, gnl|monDom2|scaffold_27 (5669722-5669949) | |
| 305-507, gnl|oryCun1|scaffold_201032 (212645-212416) | |
| 305-507, gnl|panTro1|chr4 (108757911-108758140) | |
| 305-507, gnl|rheMac2|chr6 (99791575-99791804) | |
| 305-507, gnl|rn3|chr9 (97765275-97765504) | |
| 305-507, gnl|tetNig1|chr12 (10233924-10234127) | |
| 305-507, gnl|xenTro1|scaffold_1086 (67058-67284) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 23-191, gnl|bosTau2|chr27 (8995767-8995935) | |
| 23-191, gnl|Hg17|chr5 (102919699-102919531) | |
| 23-191, gnl|Mm7|chr17 (57213630-57213462) | |
| 305-507, gnl|bosTau2|chr27 (8998928-8999130) | |
| 305-507, gnl|canFam2|chr3 (10586949-10586720) | |
| 305-507, gnl|dasNov1|scaffold_6615 (34940-35169) | |
| 305-507, gnl|echTel1|scaffold_317054 (10016-10245) | |
| 305-507, gnl|fr1|chrUn (61053929-61053701) | |
| 305-507, gnl|galGal2|chrZ (22598237-22598465) | |
| 305-507, gnl|hg17|chr5 (102915816-102916045) | |
| 305-507, gnl|Hg17|chr5 (102916017-102915815) | |
| 305-507, gnl|mm7|chr17 (57209166-57209395) | |
| 305-507, gnl|Mm7|chr17 (57209367-57209165) | |
| 305-507, gnl|monDom2|scaffold_27 (5669722-5669949) | |
| 305-507, gnl|oryCun1|scaffold_201032 (212645-212416) | |
| 305-507, gnl|panTro1|chr4 (108757911-108758140) | |
| 305-507, gnl|rheMac2|chr6 (99791575-99791804) | |
| 305-507, gnl|rn3|chr9 (97765275-97765504) | |
| 305-507, gnl|tetNig1|chr12 (10233924-10234127) | |
| 305-507, gnl|xenTro1|scaffold_1086 (67058-67284) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tbr (0.154178) |