Non-Coding RNA Search

Ss1.1-rptbr0111_j21.5

Sequence:


               
               TTTCTTCCCAGTGGAGGGAAGTCAAGGGTCAGCTCTCTGGGCCTCCTCACTGAACCTTGC
TGGGAAAAGCCTACTGCCTCCATTAGAGGCTAAAACTGCATTTTCAGAGAGGCTGGGCAT
CTTTTCTCCCATTAAAGTGGAAGCTGACCCTGCCAGCTCATCCCTCCAGCCGTGTTTCCA
TGGAAACCTGGATGGCTGTTCAAACAGCCGTATTCCCTAGTAATGTAATGGCTCCCTTGC
TGAGAGATTGACCTTCTCCGTATTTTAAAGCTGGAAAATGGTCCTGGGAAGGAAAGAGAA
TTGGCTGTTTGCATTCAATCAGAACCTTCAGTTTAAAAAAAATAATCTAAGATCCTATTT
TTGTGTGTATATATATTTATTTTTATTTATTTTTATACAACTCCATTGGCATAGTTTCAC
CCACTCTATAATTTGCATTTTTTATCCCTACGTGTGTCATACACAATGCAGCATTAAAAG
CAACCAGGAAAATATTGATTTATTTTTTAAAGCTTTTCTTCTGTGTTTGTTAACCATTTC
AAAATGTCTCCCCCAAAAGGTTCTTGGAGAGCAGCCGCTTTTCATTCATATCCTGGGTTA
ATATGACAAAAGGCCGGTGTACTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTTCCCAGTGGAGGGAAGTCAAGGGTCAGCTCTCTGGGCCTCCTCACTGAACCTTGC
TGGGAAAAGCCTACTGCCTCCATTAGAGGCTAAAACTGCATTTTCAGAGAGGCTGGGCAT
CTTTTCTCCCATTAAAGTGGAAGCTGACCCTGCCAGCTCATCCCTCCAGCCGTGTTTCCA
TGGAAACCTGGATGGCTGTTCAAACAGCCGTATTCCCTAGTAATGTAATGGCTCCCTTGC
TGAGAGATTGACCTTCTCCGTATTTTAAAGCTGGAAAATGGTCCTGGGAAGGAAAGAGAA
TTGGCTGTTTGCATTCAATCAGAACCTTCAGTTTAAAAAAAATAATCTAAGATCCTATTT
TTGTGTGTATATATATTTATTTTTATTTATTTTTATACAACTCCATTGGCATAGTTTCAC
CCACTCTATAATTTGCATTTTTTATCCCTACGTGTGTCATACACAATGCAGCATTAAAAG
CAACCAGGAAAATATTGATTTATTTTTTAAAGCTTTTCTTCTGTGTTTGTTAACCATTTC
AAAATGTCTCCCCCAAAAGGTTCTTGGAGAGCAGCCGCTTTTCATTCATATCCTGGGTTA
ATATGACAAAAGGCCGGTGTACTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               36-624, gnl|bosTau2|chr26 (20367248-20366650)
               

               
               36-624, gnl|Hg17|chr10 (112588234-112588866)
               

               
               36-624, gnl|Mm7|chr19 (53779088-53779610)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-624, gnl|bosTau2|chr26 (20367248-20366650)
               

               
               36-624, gnl|Hg17|chr10 (112588234-112588866)
               

               
               36-624, gnl|Mm7|chr19 (53779088-53779610)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nep (0.183925)
               

               
               tbr (0.154178)
               

               
               ste (0.135208)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               tbr (0.154178)
               

               
               ste (0.135208)

	36-624, gnl\|bosTau2\|chr26 (20367248-20366650)
	36-624, gnl\|Hg17\|chr10 (112588234-112588866)
	36-624, gnl\|Mm7\|chr19 (53779088-53779610)