Non-Coding RNA Search

Ss1.1-rptbr0121_l13.5

Sequence:


               
               TCTGGACAGAAACAATAAAAAGATAAGCACAAGCCTAAAAACGGCACGAGGCAAAGCACA
GCTGGCTCGACAGCAGTCCCCATCGCCAATAAGACACTCCCCATCCCCAGTCAGACATGT
TCGGGCACCGACCCCATCTCCTGTCAGGTCTGTGTCTCCGGCAGGGAGGATTTCCACCTC
CCCCATCAGATCTGTTAAGTCTCCGTTACTCATCCGCAAGGCTCAGACGCCCACCATGCC
CCCAGGCCCTGAAGTGCCTCCGCCTTGGAAGCAGGAGGGCTACATGGCTTCAACTGAGGC
TGAGATGAGAGAGACCACGGTGACAAGTGCTACTCAGATCAGGACAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGGACAGAAACAATAAAAAGATAAGCACAAGCCTAAAAACGGCACGAGGCAAAGCACA
GCTGGCTCGACAGCAGTCCCCATCGCCAATAAGACACTCCCCATCCCCAGTCAGACATGT
TCGGGCACCGACCCCATCTCCTGTCAGGTCTGTGTCTCCGGCAGGGAGGATTTCCACCTC
CCCCATCAGATCTGTTAAGTCTCCGTTACTCATCCGCAAGGCTCAGACGCCCACCATGCC
CCCAGGCCCTGAAGTGCCTCCGCCTTGGAAGCAGGAGGGCTACATGGCTTCAACTGAGGC
TGAGATGAGAGAGACCACGGTGACAAGTGCTACTCAGATCAGGACAGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               141-348, gnl|bosTau2|chr2 (7593123-7593330)
               

               
               141-348, gnl|Hg17|chr2 (179485492-179485282)
               

               
               141-348, gnl|Mm7|chr2 (76813674-76813464)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               141-348, gnl|bosTau2|chr2 (7593123-7593330)
               

               
               141-348, gnl|Hg17|chr2 (179485492-179485282)
               

               
               141-348, gnl|Mm7|chr2 (76813674-76813464)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tbr (0.154178)
               

               
               ssp (0.13552)
               

               
               ste (0.135208)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               ssp (0.13552)
               

               
               ste (0.135208)

	141-348, gnl\|bosTau2\|chr2 (7593123-7593330)
	141-348, gnl\|Hg17\|chr2 (179485492-179485282)
	141-348, gnl\|Mm7\|chr2 (76813674-76813464)