Non-Coding RNA Search

Ss1.1-rptbr0137_n11.5

Sequence:


               
               GCTCCAGTCAAGCTTTCAGAGGACTGTAGATATAGCTGAGATTTTACC------------
------------------------------------------------------------
------------------------------------------------GGTAATTTTTTT
TTTTTTATAAAGCAACGGACAACTAAAACAGTAAACTACAATCTCATTATAAGGCAAAAG
TTGAAATGACTGCTTAAAAATGTTATGTTTTTTGACTGCATCAATTGAACAAAGGTTCCA
TGTCAGAGATGGTAATAGTTCACTTCTAGACTTATAACAATTTAAGATATTGTATGTAGT
TTGAGTCATATACTTTGAAAGACACTGGCAAACACAATGAGAGCACTAAGGACTATCAGG
ATAGCGAAGACTTAACAAACTATAACATGAAGAGTACATGAGAACACCTGGTGAAAATCT
GAGTAGACTTAGGGATGACATGACATCTGTACATGTGTTTAAAGCATTAGCACAAGAAAC
ATGTAATGGCATAGCCTCTCTTCCTTCCAAGGGGAGAAACGAAGAAAAGGCTACAAGTTA
TATAACAGTAGATTTTAAATAACACAGAGAAGTATTTTTTGAGGCTTCCAGTTATCTAAC
AAAAGAATGATTTCTTCATTGGAAGAGTTGAAACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCCAGTCAAGCTTTCAGAGGACTGTAGATATAGCTGAGATTTTACC------------
------------------------------------------------------------
------------------------------------------------GGTAATTTTTTT
TTTTTTATAAAGCAACGGACAACTAAAACAGTAAACTACAATCTCATTATAAGGCAAAAG
TTGAAATGACTGCTTAAAAATGTTATGTTTTTTGACTGCATCAATTGAACAAAGGTTCCA
TGTCAGAGATGGTAATAGTTCACTTCTAGACTTATAACAATTTAAGATATTGTATGTAGT
TTGAGTCATATACTTTGAAAGACACTGGCAAACACAATGAGAGCACTAAGGACTATCAGG
ATAGCGAAGACTTAACAAACTATAACATGAAGAGTACATGAGAACACCTGGTGAAAATCT
GAGTAGACTTAGGGATGACATGACATCTGTACATGTGTTTAAAGCATTAGCACAAGAAAC
ATGTAATGGCATAGCCTCTCTTCCTTCCAAGGGGAGAAACGAAGAAAAGGCTACAAGTTA
TATAACAGTAGATTTTAAATAACACAGAGAAGTATTTTTTGAGGCTTCCAGTTATCTAAC
AAAAGAATGATTTCTTCATTGGAAGAGTTGAAACAC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               100-576, gnl|bosTau2|chr6 (7705950-7706454)
               

               
               100-576, gnl|Hg17|chr4 (111874050-111873563)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-576, gnl|bosTau2|chr6 (7705950-7706454)
               

               
               100-576, gnl|Hg17|chr4 (111874050-111873563)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tbr (0.154178)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tbr (0.154178)
               

               
               ldo (0.0970026)

	100-576, gnl\|bosTau2\|chr6 (7705950-7706454)
	100-576, gnl\|Hg17\|chr4 (111874050-111873563)