Ss1.1-rptbr0139_f8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCTGGGTGCAGCCTCGGAATCTAACAGCCCAGCTGTTCCTTACGCCCGTGGTTGGTCGT TTGGAGCTGCTGGTTGAGCATGTGGTGTGGGAGCCCAGCTGCCATGGTGGCCTTTTGCGC CGGACTTTGGTTCTCTAGCCCGGGGCGGGCGCAGGGCCAGGAGGCCGGGGGTCGGCCGGG CGCCGACTGTGAAGTATGTAAAGAATTCTTGAGCCGATTCTACAATTCCTTGATAGCCAG AGGGGTCAACTTTTCTGTGGACACCATAGAAAAAGAATTGATCAGCCTTTGCTTGGATGT CAAAGGAAAAGAAAACCGCCTGTGCTATTATCTAGGAGCCACGAAAGATGCAGCCACCAA AATCCTAAGTGAGGTCACTCGCCCAATGAGCGTGCACATGCCCGTGATGAAGATTTGTGA GAAGCTGAAGAAGATGGACAGTCAGATCTGTGAGCTGAAATACGAAAAGAAATTAGACTT GGCATCAGTGGACCTGTCCAAGATGAGAGTGGCAGAGCTGAAACAGATACTGTACAGCTG GGGAGAAGAATGTAGGGCCTGTGCAGAAAAAACTGACTACGTGAATCTCATTAAAGAACT GGCACCCAAGTACACAGAGACGCCTCCCCAGACAGAACTCTGACTCTTGGAAGCTGGCAC ACCATTGATTTCAGTTAGAGACAAAATGACTTTCTAGAGTATGGGTGTGTTGGTTGAGAG TCACCAGGAATTGCAATGTGTGTGGACTCTGGACTTTCTTTTTTGATATTACACCTTGGA ATGGGTTACCTAGCTTTCTACATAGAACTGCCAATATTACTGGTTTCTTAAATCTGCAGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCTGGGTGCAGCCTCGGAATCTAACAGCCCAGCTGTTCCTTACGCCCGTGGTTGGTCGT TTGGAGCTGCTGGTTGAGCATGTGGTGTGGGAGCCCAGCTGCCATGGTGGCCTTTTGCGC CGGACTTTGGTTCTCTAGCCCGGGGCGGGCGCAGGGCCAGGAGGCCGGGGGTCGGCCGGG CGCCGACTGTGAAGTATGTAAAGAATTCTTGAGCCGATTCTACAATTCCTTGATAGCCAG AGGGGTCAACTTTTCTGTGGACACCATAGAAAAAGAATTGATCAGCCTTTGCTTGGATGT CAAAGGAAAAGAAAACCGCCTGTGCTATTATCTAGGAGCCACGAAAGATGCAGCCACCAA AATCCTAAGTGAGGTCACTCGCCCAATGAGCGTGCACATGCCCGTGATGAAGATTTGTGA GAAGCTGAAGAAGATGGACAGTCAGATCTGTGAGCTGAAATACGAAAAGAAATTAGACTT GGCATCAGTGGACCTGTCCAAGATGAGAGTGGCAGAGCTGAAACAGATACTGTACAGCTG GGGAGAAGAATGTAGGGCCTGTGCAGAAAAAACTGACTACGTGAATCTCATTAAAGAACT GGCACCCAAGTACACAGAGACGCCTCCCCAGACAGAACTCTGACTCTTGGAAGCTGGCAC ACCATTGATTTCAGTTAGAGACAAAATGACTTTCTAGAGTATGGGTGTGTTGGTTGAGAG TCACCAGGAATTGCAATGTGTGTGGACTCTGGACTTTCTTTTTTGATATTACACCTTGGA ATGGGTTACCTAGCTTTCTACATAGAACTGCCAATATTACTGGTTTCTTAAATCTGCAGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 193-322, gnl|bosTau2|chr13 (17429880-17430009) | |
| 193-322, gnl|canFam2|chr2 (24640857-24640697) | |
| 193-322, gnl|danRer3|chr4 (9824276-9824423) | |
| 193-322, gnl|dasNov1|scaffold_4065 (106019-105876) | |
| 193-322, gnl|echTel1|scaffold_258742 (9429-9589) | |
| 193-322, gnl|fr1|chrUn (296755960-296755822) | |
| 193-322, gnl|hg17|chr10 (14910133-14910292) | |
| 193-322, gnl|Hg17|chr10 (14910279-14910150) | |
| 193-322, gnl|loxAfr1|scaffold_5474 (76434-76594) | |
| 193-322, gnl|mm7|chr2 (3436719-3436560) | |
| 193-322, gnl|Mm7|chr2 (3436571-3436700) | |
| 193-322, gnl|monDom2|scaffold_30 (14289326-14289486) | |
| 193-322, gnl|oryCun1|scaffold_145581 (4091-3931) | |
| 193-322, gnl|panTro1|chr8 (15378176-15378335) | |
| 193-322, gnl|rheMac2|chr9 (15105137-15105296) | |
| 193-322, gnl|rn3|chr17 (85849949-85850108) | |
| 193-322, gnl|tetNig1|chrUn_random (114259669-114259828) | |
| 193-322, gnl|xenTro1|scaffold_200 (949832-949977) | |
| 464-840, gnl|bosTau2|chr13 (17436748-17437123) | |
| 464-840, gnl|Hg17|chr10 (14902164-14901791) | |
| 464-840, gnl|Mm7|chr2 (3441082-3441446) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 193-322, gnl|bosTau2|chr13 (17429880-17430009) | |
| 193-322, gnl|canFam2|chr2 (24640857-24640697) | |
| 193-322, gnl|danRer3|chr4 (9824276-9824423) | |
| 193-322, gnl|dasNov1|scaffold_4065 (106019-105876) | |
| 193-322, gnl|echTel1|scaffold_258742 (9429-9589) | |
| 193-322, gnl|fr1|chrUn (296755960-296755822) | |
| 193-322, gnl|hg17|chr10 (14910133-14910292) | |
| 193-322, gnl|Hg17|chr10 (14910279-14910150) | |
| 193-322, gnl|loxAfr1|scaffold_5474 (76434-76594) | |
| 193-322, gnl|mm7|chr2 (3436719-3436560) | |
| 193-322, gnl|Mm7|chr2 (3436571-3436700) | |
| 193-322, gnl|monDom2|scaffold_30 (14289326-14289486) | |
| 193-322, gnl|oryCun1|scaffold_145581 (4091-3931) | |
| 193-322, gnl|panTro1|chr8 (15378176-15378335) | |
| 193-322, gnl|rheMac2|chr9 (15105137-15105296) | |
| 193-322, gnl|rn3|chr17 (85849949-85850108) | |
| 193-322, gnl|tetNig1|chrUn_random (114259669-114259828) | |
| 193-322, gnl|xenTro1|scaffold_200 (949832-949977) | |
| 464-840, gnl|bosTau2|chr13 (17436748-17437123) | |
| 464-840, gnl|Hg17|chr10 (14902164-14901791) | |
| 464-840, gnl|Mm7|chr2 (3441082-3441446) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tbr (0.154178) | |
| isp (0.150376) |