Non-Coding RNA Search

Ss1.1-rpty616b_f17.5

Sequence:


               
               CTTCCTCCCGTGCTACCCCGTGGCCCTCCGTCCAGGACCAAGGCCCCCTTCCCCCCCACC
GGCTGTCGTGAACACCTGTCTTAGATGTGGTCCTATATTCGGTTCGCTAAGATGAGTGAA
AACCTGTGCCCTCTGGTCTCCATGAGTTTGACCAATGCTTCTCTGTCTGGGCATTGTTCC
TGTCCTGCCCCATGATTGCCCCGGGAAATGAGTTCAATCACCACCGCCTACCCTGTTCTC
TCACCACTTCCAGCAAATCCGTCAGATCGGGGAGTTGATAACCTCTGTATGGCTCGTGTA
CTTTCGTTCTGTGGTTCTCCTTGCACCCGTTGGGCTGTTTACTTTCAAAAGGTGACATGG
TCTCTTTAAACATGGCCTTCAAAGTTACTTGCATATCTGAGAACAGCTGTGTCCTGCCCC
AGTTTGTATTTGGGTTGTTGGCGCTCTTTTCTCCTTCCTCCCCCGTCTCCTTAACTTATC
TGTCTTACGGCACTTACTATAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCTCCCGTGCTACCCCGTGGCCCTCCGTCCAGGACCAAGGCCCCCTTCCCCCCCACC
GGCTGTCGTGAACACCTGTCTTAGATGTGGTCCTATATTCGGTTCGCTAAGATGAGTGAA
AACCTGTGCCCTCTGGTCTCCATGAGTTTGACCAATGCTTCTCTGTCTGGGCATTGTTCC
TGTCCTGCCCCATGATTGCCCCGGGAAATGAGTTCAATCACCACCGCCTACCCTGTTCTC
TCACCACTTCCAGCAAATCCGTCAGATCGGGGAGTTGATAACCTCTGTATGGCTCGTGTA
CTTTCGTTCTGTGGTTCTCCTTGCACCCGTTGGGCTGTTTACTTTCAAAAGGTGACATGG
TCTCTTTAAACATGGCCTTCAAAGTTACTTGCATATCTGAGAACAGCTGTGTCCTGCCCC
AGTTTGTATTTGGGTTGTTGGCGCTCTTTTCTCCTTCCTCCCCCGTCTCCTTAACTTATC
TGTCTTACGGCACTTACTATAATT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               54-503, gnl|bosTau2|chrX (14176674-14176206)
               

               
               54-503, gnl|Hg17|chrX (152102027-152102496)
               

               
               54-503, gnl|Mm7|chrX (68745102-68745550)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-503, gnl|bosTau2|chrX (14176674-14176206)
               

               
               54-503, gnl|Hg17|chrX (152102027-152102496)
               

               
               54-503, gnl|Mm7|chrX (68745102-68745550)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               fbs (0.526039)
               

               
               cag (0.151194)
               

               
               pty (0.142714)
               

               
               cov (0.132153)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.526039)
               

               
               cag (0.151194)
               

               
               pty (0.142714)
               

               
               cov (0.132153)

	54-503, gnl\|bosTau2\|chrX (14176674-14176206)
	54-503, gnl\|Hg17\|chrX (152102027-152102496)
	54-503, gnl\|Mm7\|chrX (68745102-68745550)