Non-Coding RNA Search

Ss1.1-rpty617b_p6.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAGGGACAGATTTATTAGGGCCTCA
GAAGCCTGGGGCAAACCCACAGGGGTCCCTCCCTCCTATTGCCACCATCGTCCCGGCGAC
CCGGCCCATTGTGCCCTCTGGCGTCTGCTGTGCTACAGGAGGTTCACAGTGGCCACCACC
TGCTTGCAGCCAGTGACGGCAAACTCACGGCCGGCCACGCGGTAGTAGCTGAGCCTCGCG
GCCAGAAGCTCGGCGTGGGCCTGCTCTGGGAAGAAGCCCTCCCCGGCCATCTCATCCCGG
AAGCAGTTGACCACATCCCGCTTGTCCAGCAGCAGGAAAGGCACGATGGCCGCGGCCTGC
CACAGCGGGTGCTCGCGGACCAGGAGCGCCTGCAGGCGGACGCGCAGCTCCTCCTCGGCC
TGTGCCGCCATCGCAGCGGCACGGGCCCCGTGGGCGCCGTCGGGGCGCAGGGCCAGCGCG
CGGGACGCGTTCTGCAGCACGAAGCGCGTGACCTCCGCGCCGCCGGCGCCGCTGAGGAGC
ACGTAGATGGCGTTGTGGAAGTGGTGTGAGCGCTGCGGCTGCAGGAAGCCGTGCAGCTCA
TCCAGCAGCGCCTGCGGCAGGAGCTCCACCTCGTCCAGCACCAGGAGCGGGGTCTTCTCC
TCGGCCTCGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAGGGACAGATTTATTAGGGCCTCA
GAAGCCTGGGGCAAACCCACAGGGGTCCCTCCCTCCTATTGCCACCATCGTCCCGGCGAC
CCGGCCCATTGTGCCCTCTGGCGTCTGCTGTGCTACAGGAGGTTCACAGTGGCCACCACC
TGCTTGCAGCCAGTGACGGCAAACTCACGGCCGGCCACGCGGTAGTAGCTGAGCCTCGCG
GCCAGAAGCTCGGCGTGGGCCTGCTCTGGGAAGAAGCCCTCCCCGGCCATCTCATCCCGG
AAGCAGTTGACCACATCCCGCTTGTCCAGCAGCAGGAAAGGCACGATGGCCGCGGCCTGC
CACAGCGGGTGCTCGCGGACCAGGAGCGCCTGCAGGCGGACGCGCAGCTCCTCCTCGGCC
TGTGCCGCCATCGCAGCGGCACGGGCCCCGTGGGCGCCGTCGGGGCGCAGGGCCAGCGCG
CGGGACGCGTTCTGCAGCACGAAGCGCGTGACCTCCGCGCCGCCGGCGCCGCTGAGGAGC
ACGTAGATGGCGTTGTGGAAGTGGTGTGAGCGCTGCGGCTGCAGGAAGCCGTGCAGCTCA
TCCAGCAGCGCCTGCGGCAGGAGCTCCACCTCGTCCAGCACCAGGAGCGGGGTCTTCTCC
TCGGCCTCGGCC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               39-672, gnl|bosTau2|chr11 (85423744-85424360)
               

               
               39-672, gnl|Hg17|chr9 (137450351-137449737)
               

               
               39-672, gnl|Mm7|chr2 (25201923-25202457)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               39-672, gnl|bosTau2|chr11 (85423744-85424360)
               

               
               39-672, gnl|Hg17|chr9 (137450351-137449737)
               

               
               39-672, gnl|Mm7|chr2 (25201923-25202457)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pty (0.142714)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)
               

               
               ecc (0.115035)

	39-672, gnl\|bosTau2\|chr11 (85423744-85424360)
	39-672, gnl\|Hg17\|chr9 (137450351-137449737)
	39-672, gnl\|Mm7\|chr2 (25201923-25202457)