Non-Coding RNA Search

Ss1.1-rpty618b_p13.5

Sequence:


               
               AGGACCTGGAGCAGGCCTTAGCTGCCTTCTCAGGCACCTCTGTGGGTTCACATCGTGGCC
CTGTGCTCCCTCAACCTCAGGGTGCACCCGGGTCACACCAAGCACAGTCAGCTCAGTGAT
CAGCAACTGCCCAGGTCTGCGGTACCTCAACCTGGAGTCCTGCCGCTGCCTTCCGAGGGG
CCTGAAACGGGCCTACAGGGGCCCAGAGGAAATCCGGTGGTGCCTGGAGCAACTGCTCAC
CAGCCTACCCGCTCCAAGCTAGGCAGCTCCAGGCAGCCCTGCCGGCCCACCTTCCCATTT
GGGAAGTCTGAGCACTTGGTTACAAGAAAACATTTTTGGAGTTCCCGTCGTGGCGCAGTG
GTTAACGAATCTGACGAGGAACCGTGAGGTTGCGGGCTCCATCCCTGGCCTTGCTCAGTG
GGTAAAGGATCTGGCGTTGCCGTGAGCTGTGGTGTAGGTTGCAGGCGCGGCTCGGATCCT
GCCTCGCTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGACCTGGAGCAGGCCTTAGCTGCCTTCTCAGGCACCTCTGTGGGTTCACATCGTGGCC
CTGTGCTCCCTCAACCTCAGGGTGCACCCGGGTCACACCAAGCACAGTCAGCTCAGTGAT
CAGCAACTGCCCAGGTCTGCGGTACCTCAACCTGGAGTCCTGCCGCTGCCTTCCGAGGGG
CCTGAAACGGGCCTACAGGGGCCCAGAGGAAATCCGGTGGTGCCTGGAGCAACTGCTCAC
CAGCCTACCCGCTCCAAGCTAGGCAGCTCCAGGCAGCCCTGCCGGCCCACCTTCCCATTT
GGGAAGTCTGAGCACTTGGTTACAAGAAAACATTTTTGGAGTTCCCGTCGTGGCGCAGTG
GTTAACGAATCTGACGAGGAACCGTGAGGTTGCGGGCTCCATCCCTGGCCTTGCTCAGTG
GGTAAAGGATCTGGCGTTGCCGTGAGCTGTGGTGTAGGTTGCAGGCGCGGCTCGGATCCT
GCCTCGCTGTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               109-287, gnl|bosTau2|chr14 (3447703-3447881)
               

               
               109-287, gnl|Hg17|chr8 (145550149-145549967)
               

               
               109-287, gnl|Mm7|chr15 (76618519-76618348)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               109-287, gnl|bosTau2|chr14 (3447703-3447881)
               

               
               109-287, gnl|Hg17|chr8 (145550149-145549967)
               

               
               109-287, gnl|Mm7|chr15 (76618519-76618348)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ton (0.1755)
               

               
               pty (0.142714)
               

               
               eru (0.120048)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)
               

               
               pty (0.142714)
               

               
               eru (0.120048)

	109-287, gnl\|bosTau2\|chr14 (3447703-3447881)
	109-287, gnl\|Hg17\|chr8 (145550149-145549967)
	109-287, gnl\|Mm7\|chr15 (76618519-76618348)