Non-Coding RNA Search

Ss1.1-rpty620b_o8.5

Sequence:


               
               AAATTGACCTGCCTATTCTTTTCAATGTCTATCTTACCAAGGTTTGGGTCTTTTAAAACC
AGCAGTTTAAAATCATCAGTATAACTCTTTTAAAGAATGTTAGGTCCTTCTCCTTTAAGG
ATAAAATTGCACAAGCACAGGACACCATGCTTAGTACTTCATACCCTGGCGTGTTCCACT
TCGAGCCTTGCCATCCCGGAGAATACTGTGGTGTGAATGTGCTCACTAGGCCTGCATAAT
AATTGACCTGGAGACCTGTTGAACCTGGCCATGATACGACAGTTCACACAGGTCAATACT
GAATGTAAACTAAAATTACAATGAGAATTGTTGTATTCGATTTTTTTGGCTGTAATTTAT
GCAATTGCTTTTTTGTGATTTTTAGAAAAGGAGGCACCTGTATTACTTTATTACTGTAAA
ATTTTCTTAACCAAAATTTGGTGAATTTCACTAGCCAGTCTACCTCACATTTTGTTTATG
ATTCTAAATTGTCTTAAGTTGTGTCTACAGTGTGTTCTTGTCCTTTCATTTGATTTCATG
AATGTATTAAAATTCTCTCCCATCCTCCAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATTGACCTGCCTATTCTTTTCAATGTCTATCTTACCAAGGTTTGGGTCTTTTAAAACC
AGCAGTTTAAAATCATCAGTATAACTCTTTTAAAGAATGTTAGGTCCTTCTCCTTTAAGG
ATAAAATTGCACAAGCACAGGACACCATGCTTAGTACTTCATACCCTGGCGTGTTCCACT
TCGAGCCTTGCCATCCCGGAGAATACTGTGGTGTGAATGTGCTCACTAGGCCTGCATAAT
AATTGACCTGGAGACCTGTTGAACCTGGCCATGATACGACAGTTCACACAGGTCAATACT
GAATGTAAACTAAAATTACAATGAGAATTGTTGTATTCGATTTTTTTGGCTGTAATTTAT
GCAATTGCTTTTTTGTGATTTTTAGAAAAGGAGGCACCTGTATTACTTTATTACTGTAAA
ATTTTCTTAACCAAAATTTGGTGAATTTCACTAGCCAGTCTACCTCACATTTTGTTTATG
ATTCTAAATTGTCTTAAGTTGTGTCTACAGTGTGTTCTTGTCCTTTCATTTGATTTCATG
AATGTATTAAAATTCTCTCCCATCCTCCAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-576, gnl|bosTau2|chr24 (25015740-25015187)
               

               
               1-576, gnl|Hg17|chr18 (17358826-17359382)
               

               
               1-576, gnl|Mm7|chr18 (10768928-10769494)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-576, gnl|bosTau2|chr24 (25015740-25015187)
               

               
               1-576, gnl|Hg17|chr18 (17358826-17359382)
               

               
               1-576, gnl|Mm7|chr18 (10768928-10769494)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sto (0.179824)
               

               
               pty (0.142714)
               

               
               ova (0.129132)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               pty (0.142714)
               

               
               ova (0.129132)

	1-576, gnl\|bosTau2\|chr24 (25015740-25015187)
	1-576, gnl\|Hg17\|chr18 (17358826-17359382)
	1-576, gnl\|Mm7\|chr18 (10768928-10769494)