Ss1.1-rpty630b_g11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGACCGAGAACCAGCAGTGAGCCAATGTGAAGAATTCCTTTTCGAAACCTGCAGATGCAG GGAGGCTTTGCAGTGCTTTTCAGAGACTGAGAGTGAGTGCGTGTGTGGACACGTGGACCA GGCCCGGGAGAGCAGAGGGGCCAGGCACCGCGGAAGTCGTGGGCTCTCAGGGTACTCCAG TGTCAGAAACAGCACTAGCTGTCACCCCCTTTGAGGGCAGAACAGGCCCCCCATCCACTC CGGGCTGTGCAAGGGTGGGGCAGGCAGCAGCCAACTTCCTGCCTCTGGCCTTCTGTTTCC AGCCCCGTGGGGGTGGGCACCCTCCCAAACACCAGACCACACAGTCCTCCAAAAATAAAC ATTTTATATAGAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGACCGAGAACCAGCAGTGAGCCAATGTGAAGAATTCCTTTTCGAAACCTGCAGATGCAG GGAGGCTTTGCAGTGCTTTTCAGAGACTGAGAGTGAGTGCGTGTGTGGACACGTGGACCA GGCCCGGGAGAGCAGAGGGGCCAGGCACCGCGGAAGTCGTGGGCTCTCAGGGTACTCCAG TGTCAGAAACAGCACTAGCTGTCACCCCCTTTGAGGGCAGAACAGGCCCCCCATCCACTC CGGGCTGTGCAAGGGTGGGGCAGGCAGCAGCCAACTTCCTGCCTCTGGCCTTCTGTTTCC AGCCCCGTGGGGGTGGGCACCCTCCCAAACACCAGACCACACAGTCCTCCAAAAATAAAC ATTTTATATAGAAAAAAAAAAAAA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 41-135, - strand, RNAz p=0.683932 | |
| 205-345, + strand, RNAz p=0.875825 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 41-135, - strand, RNAz p=0.683932 | |
| 205-345, + strand, RNAz p=0.875825 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_032376, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-372, gnl|bosTau2|chr19 (38265446-38265063) | |
| 1-372, gnl|Hg17|chr17 (39444479-39444084) | |
| 1-372, gnl|Mm7|chr11 (102261996-102261587) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-372, gnl|bosTau2|chr19 (38265446-38265063) | |
| 1-372, gnl|Hg17|chr17 (39444479-39444084) | |
| 1-372, gnl|Mm7|chr11 (102261996-102261587) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.197785) | |
| pty (0.142714) | |
| eje (0.0988338) |