Non-Coding RNA Search

Ss1.1-rpty635b_a15.5

Sequence:


               
               TTCCCCTGCAGCTCTACAGAGACTCTCCCTCCTCACCCCCCACCCGAGCTCCCGAGGGTG
GCTGTGCCCGGCCCCGGTTCGGGGTTGGCCAGCGGCTCGGGGGCGGGGTTGCCGGGTCTC
AGCCTCCGCAGACCTCCCCACCCGCCAGGTCACCTGACTCGCTCCCACCCCTGCCACTCC
CCAAGGAGGCTCAGCTCGTGGGCAAGCTGGGACTTGGGCCGGGGCCTGGAAGAGTGATTG
GCTGGGAGGCTGCGGGAGAAGGCCAGGAGGCCCGGCAGAGTTGGGGAAGGGCGGGGAGCG
CTGGCCCTGGGGGAGGGGAGTCCGCTCCCTTTGGCTGGCCGCCCTACCCCCACAAATACT
CAGGACGTCTTCACTTACTAAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCCCTGCAGCTCTACAGAGACTCTCCCTCCTCACCCCCCACCCGAGCTCCCGAGGGTG
GCTGTGCCCGGCCCCGGTTCGGGGTTGGCCAGCGGCTCGGGGGCGGGGTTGCCGGGTCTC
AGCCTCCGCAGACCTCCCCACCCGCCAGGTCACCTGACTCGCTCCCACCCCTGCCACTCC
CCAAGGAGGCTCAGCTCGTGGGCAAGCTGGGACTTGGGCCGGGGCCTGGAAGAGTGATTG
GCTGGGAGGCTGCGGGAGAAGGCCAGGAGGCCCGGCAGAGTTGGGGAAGGGCGGGGAGCG
CTGGCCCTGGGGGAGGGGAGTCCGCTCCCTTTGGCTGGCCGCCCTACCCCCACAAATACT
CAGGACGTCTTCACTTACTAAAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-375, gnl|bosTau2|chr19 (37205115-37204733)
               

               
               5-375, gnl|Hg17|chr17 (40576886-40577277)
               

               
               5-375, gnl|Mm7|chr11 (103220877-103221193)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-375, gnl|bosTau2|chr19 (37205115-37204733)
               

               
               5-375, gnl|Hg17|chr17 (40576886-40577277)
               

               
               5-375, gnl|Mm7|chr11 (103220877-103221193)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               pty (0.142714)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               pty (0.142714)

	5-375, gnl\|bosTau2\|chr19 (37205115-37204733)
	5-375, gnl\|Hg17\|chr17 (40576886-40577277)
	5-375, gnl\|Mm7\|chr11 (103220877-103221193)