Non-Coding RNA Search

Ss1.1-rpty637b_g12.5

Sequence:


               
               GAATGTTATTAGTGATTGATCTCCCACCAGCAGTGAAAGAGAGTACGTTTCCTCCTACTT
TAATTGTATGTTATACTTTTTGACTAAGCTCATCTGAGAAATAGAACAATGTATCTCCTT
CTAGGTTTGATTTGTATTTCTTTTACTCATATGTTTTATATTTTATATATTTTAAAAGTT
TTCTTTATGTAAATACTATGTATTTATCTATATATTTTATTTATATTTCTTTTTCTATGA
ACTACTTGTTCATGTTTCTTTGCCTGAGATTCTTTTCTTACTGATATTTAAGCTCTCTTT
ATTTTTTTTTAGATTAACTTTCATGTCATAGACACTGTGCAATTTCCCAGTTTGTCATTT
ATCTTTTGACTTGGTTTAGAGCAGGGAGAGGCAACACTGGTGGTGGGTACTTGCCTTAAA
TTTATATAATCAAAGGGTTCATTCATACAGCTTTCCCCAAACCAAAAAGCAGTCTGTCCC
AAAGGTAAATTCAGCTTCCTGCTTCTTGCACAGTTGCTTTAGAAAGACAGGGGTTTTGTT
TGCCCTGTATTTTGCACCTAAAAAAAAGTGCCTTGAACTGAGGATCACGATGCCACCTTT
CATCTAATGTCAACTAAGAACAGATGGACAAGGAGATTTGTATCTTTCTAATCTGAGCAG
ACTGCACAGAAGATAAAGAATAACCAGGCCTTTCTGTAAGGGGCTATCTTTGAAATGTAT
TCATTATTAACAATAATTTATTTGAATGAAATTAATATAAGGAAAGTCGAGCTCCTCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATGTTATTAGTGATTGATCTCCCACCAGCAGTGAAAGAGAGTACGTTTCCTCCTACTT
TAATTGTATGTTATACTTTTTGACTAAGCTCATCTGAGAAATAGAACAATGTATCTCCTT
CTAGGTTTGATTTGTATTTCTTTTACTCATATGTTTTATATTTTATATATTTTAAAAGTT
TTCTTTATGTAAATACTATGTATTTATCTATATATTTTATTTATATTTCTTTTTCTATGA
ACTACTTGTTCATGTTTCTTTGCCTGAGATTCTTTTCTTACTGATATTTAAGCTCTCTTT
ATTTTTTTTTAGATTAACTTTCATGTCATAGACACTGTGCAATTTCCCAGTTTGTCATTT
ATCTTTTGACTTGGTTTAGAGCAGGGAGAGGCAACACTGGTGGTGGGTACTTGCCTTAAA
TTTATATAATCAAAGGGTTCATTCATACAGCTTTCCCCAAACCAAAAAGCAGTCTGTCCC
AAAGGTAAATTCAGCTTCCTGCTTCTTGCACAGTTGCTTTAGAAAGACAGGGGTTTTGTT
TGCCCTGTATTTTGCACCTAAAAAAAAGTGCCTTGAACTGAGGATCACGATGCCACCTTT
CATCTAATGTCAACTAAGAACAGATGGACAAGGAGATTTGTATCTTTCTAATCTGAGCAG
ACTGCACAGAAGATAAAGAATAACCAGGCCTTTCTGTAAGGGGCTATCTTTGAAATGTAT
TCATTATTAACAATAATTTATTTGAATGAAATTAATATAAGGAAAGTCGAGCTCCTCTGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               211-780, gnl|bosTau2|chr17 (20178763-20178189)
               

               
               211-780, gnl|Hg17|chr4 (124096062-124096587)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               211-780, gnl|bosTau2|chr17 (20178763-20178189)
               

               
               211-780, gnl|Hg17|chr4 (124096062-124096587)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pty (0.142714)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pty (0.142714)
               

               
               kid (0.129735)

	211-780, gnl\|bosTau2\|chr17 (20178763-20178189)
	211-780, gnl\|Hg17\|chr4 (124096062-124096587)