Ss1.1-rpty637b_o12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGCATCATGACAGCTCTGGTCACGCTGCTGTTCCTGCTCCTGCTGGGGGCCCAGACCCA GCATGGGGCTGAGTGGACCTACTCAGATGGGGAGCTGGATGAAGCACACTGGTCCAGGGA GTACCCCGACTGCGATGGGAGGAGACAGTCGCCCATCGACGTGCAGAGGAAGAGCGTGCA GTACAACCCTGCCCTGAGGGCCCTGAGCCTGACAGGCTACGAGGCCCAGGAGGGGGAGTT CTCCATGATCAACAACGGCCACACAGTACAGATCAGCCTGCCCTCCACCATGCGCTTGAC GGCCCCCGACGGCACCCAGTACATAGCCAAGCAGATGCACTTCCACTGGGGTGGCGCGTT CTCCGAGATCAGTGGCTCCGAGCACACCATTGATGGGATCAGATATGTGACCGAGGTTCA CGTTGTCCACTACAATTCCAAATACAAGAGCTACGATGAAGCCCAGACGGCCCCGGACGG CTTGGCTGTGCTGGCAGCCCTCTTCGAGATCAAGGATTACGCCGAAAACACTTACTACAG TGACTTCATTTCTCACCTGAAGAACATCCGGAATCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGCATCATGACAGCTCTGGTCACGCTGCTGTTCCTGCTCCTGCTGGGGGCCCAGACCCA GCATGGGGCTGAGTGGACCTACTCAGATGGGGAGCTGGATGAAGCACACTGGTCCAGGGA GTACCCCGACTGCGATGGGAGGAGACAGTCGCCCATCGACGTGCAGAGGAAGAGCGTGCA GTACAACCCTGCCCTGAGGGCCCTGAGCCTGACAGGCTACGAGGCCCAGGAGGGGGAGTT CTCCATGATCAACAACGGCCACACAGTACAGATCAGCCTGCCCTCCACCATGCGCTTGAC GGCCCCCGACGGCACCCAGTACATAGCCAAGCAGATGCACTTCCACTGGGGTGGCGCGTT CTCCGAGATCAGTGGCTCCGAGCACACCATTGATGGGATCAGATATGTGACCGAGGTTCA CGTTGTCCACTACAATTCCAAATACAAGAGCTACGATGAAGCCCAGACGGCCCCGGACGG CTTGGCTGTGCTGGCAGCCCTCTTCGAGATCAAGGATTACGCCGAAAACACTTACTACAG TGACTTCATTTCTCACCTGAAGAACATCCGGAATCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 83-264, gnl|bosTau2|chr16 (31617501-31617682) | |
| 83-264, gnl|canFam2|chr5 (65359020-65359230) | |
| 83-264, gnl|danRer3|chr23 (31161788-31161579) | |
| 83-264, gnl|echTel1|scaffold_287930 (51869-51627) | |
| 83-264, gnl|fr1|chrUn (285757390-285757599) | |
| 83-264, gnl|hg17|chr1 (8943544-8943779) | |
| 83-264, gnl|Hg17|chr1 (8943584-8943765) | |
| 83-264, gnl|mm7|chr4 (149187873-149187631) | |
| 83-264, gnl|Mm7|chr4 (149187829-149187643) | |
| 83-264, gnl|oryCun1|scaffold_213208 (34757-34518) | |
| 83-264, gnl|panTro1|chr1 (8944733-8944968) | |
| 83-264, gnl|rheMac2|chr1 (11996233-11996468) | |
| 83-264, gnl|rn3|chr5 (167358348-167358106) | |
| 83-264, gnl|tetNig1|chr9 (2809697-2809901) | |
| 265-417, gnl|bosTau2|chr16 (31623718-31623870) | |
| 265-417, gnl|canFam2|chr5 (65366807-65366957) | |
| 265-417, gnl|danRer3|chr23 (31161403-31161250) | |
| 265-417, gnl|dasNov1|scaffold_152349 (157-289) | |
| 265-417, gnl|echTel1|scaffold_287930 (49124-48984) | |
| 265-417, gnl|fr1|chrUn (285758282-285758406) | |
| 265-417, gnl|hg17|chr1 (8951432-8951578) | |
| 265-417, gnl|Hg17|chr1 (8951460-8951612) | |
| 265-417, gnl|mm7|chr4 (149187027-149186894) | |
| 265-417, gnl|Mm7|chr4 (149187010-149186858) | |
| 265-417, gnl|panTro1|chr1 (8952579-8952725) | |
| 265-417, gnl|rheMac2|chr1 (12006084-12006230) | |
| 265-417, gnl|rn3|chr5 (167355234-167355101) | |
| 265-417, gnl|tetNig1|chr9 (2810259-2810377) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 83-264, gnl|bosTau2|chr16 (31617501-31617682) | |
| 83-264, gnl|canFam2|chr5 (65359020-65359230) | |
| 83-264, gnl|danRer3|chr23 (31161788-31161579) | |
| 83-264, gnl|echTel1|scaffold_287930 (51869-51627) | |
| 83-264, gnl|fr1|chrUn (285757390-285757599) | |
| 83-264, gnl|hg17|chr1 (8943544-8943779) | |
| 83-264, gnl|Hg17|chr1 (8943584-8943765) | |
| 83-264, gnl|mm7|chr4 (149187873-149187631) | |
| 83-264, gnl|Mm7|chr4 (149187829-149187643) | |
| 83-264, gnl|oryCun1|scaffold_213208 (34757-34518) | |
| 83-264, gnl|panTro1|chr1 (8944733-8944968) | |
| 83-264, gnl|rheMac2|chr1 (11996233-11996468) | |
| 83-264, gnl|rn3|chr5 (167358348-167358106) | |
| 83-264, gnl|tetNig1|chr9 (2809697-2809901) | |
| 265-417, gnl|bosTau2|chr16 (31623718-31623870) | |
| 265-417, gnl|canFam2|chr5 (65366807-65366957) | |
| 265-417, gnl|danRer3|chr23 (31161403-31161250) | |
| 265-417, gnl|dasNov1|scaffold_152349 (157-289) | |
| 265-417, gnl|echTel1|scaffold_287930 (49124-48984) | |
| 265-417, gnl|fr1|chrUn (285758282-285758406) | |
| 265-417, gnl|hg17|chr1 (8951432-8951578) | |
| 265-417, gnl|Hg17|chr1 (8951460-8951612) | |
| 265-417, gnl|mm7|chr4 (149187027-149186894) | |
| 265-417, gnl|Mm7|chr4 (149187010-149186858) | |
| 265-417, gnl|panTro1|chr1 (8952579-8952725) | |
| 265-417, gnl|rheMac2|chr1 (12006084-12006230) | |
| 265-417, gnl|rn3|chr5 (167355234-167355101) | |
| 265-417, gnl|tetNig1|chr9 (2810259-2810377) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pty (0.285429) | |
| fli (0.202881) |