Non-Coding RNA Search

Ss1.1-rrec07_d9.5

Sequence:


               
               GGGATTTTTTTTTCTGACTATGTATATAATTTCTTAGCATTTTACTTCTGAGAATTGATT
AAAGCTTTTCTGTCTCTTTAAGTCAGTAAATAGAAAATGTCTACTGGAGACCAATTGACA
GTGTTTCTAGGTATTTGCTTGGAGAAATAGGAATCTCCTTAACTGATTGAAAAGTTTGTT
CTGATGTATGCTGAACAGACATGAATAGCTAATGTTTATTGAGTATTTACTATGTGCCAG
GTACCATGTCAAGGACTATCTATGAATTATATCACTTTATTTTCATAGCAACAGTCTGAG
ATAGCTACTTATATTATCTTCCTTTTCTGATAAAATTGAGACACACAAACTTTAAATAAT
GTGTCCAGAGTCACACTGTTAGCATGCTGTGAGAAAGGGATTGACTCCATGTGGTTTGAC
AACATATTCTGAACCCTGATGACTATGTTACATCAAAACCAGAACCCTTAAGTCCTGTAG
CATCTAATCACATTTGGTTTTGGCTTTCAGGATTATAAATGTGTTCTCAGGGCCTCAAAC
CTTGTAACTGGTATATTCTGTTCTCTTCAAAGTATATGGGGCCATCTATATGGCTAGGCT
CATTGTCTTTCCATCTGACACCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGATTTTTTTTTCTGACTATGTATATAATTTCTTAGCATTTTACTTCTGAGAATTGATT
AAAGCTTTTCTGTCTCTTTAAGTCAGTAAATAGAAAATGTCTACTGGAGACCAATTGACA
GTGTTTCTAGGTATTTGCTTGGAGAAATAGGAATCTCCTTAACTGATTGAAAAGTTTGTT
CTGATGTATGCTGAACAGACATGAATAGCTAATGTTTATTGAGTATTTACTATGTGCCAG
GTACCATGTCAAGGACTATCTATGAATTATATCACTTTATTTTCATAGCAACAGTCTGAG
ATAGCTACTTATATTATCTTCCTTTTCTGATAAAATTGAGACACACAAACTTTAAATAAT
GTGTCCAGAGTCACACTGTTAGCATGCTGTGAGAAAGGGATTGACTCCATGTGGTTTGAC
AACATATTCTGAACCCTGATGACTATGTTACATCAAAACCAGAACCCTTAAGTCCTGTAG
CATCTAATCACATTTGGTTTTGGCTTTCAGGATTATAAATGTGTTCTCAGGGCCTCAAAC
CTTGTAACTGGTATATTCTGTTCTCTTCAAAGTATATGGGGCCATCTATATGGCTAGGCT
CATTGTCTTTCCATCTGACACCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-624, gnl|bosTau2|chr15 (27592502-27591878)
               

               
               5-624, gnl|Hg17|chr11 (11570425-11569833)
               

               
               5-624, gnl|Mm7|chr7 (107665122-107664536)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-624, gnl|bosTau2|chr15 (27592502-27591878)
               

               
               5-624, gnl|Hg17|chr11 (11570425-11569833)
               

               
               5-624, gnl|Mm7|chr7 (107665122-107664536)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               rec (0.346141)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.346141)

	5-624, gnl\|bosTau2\|chr15 (27592502-27591878)
	5-624, gnl\|Hg17\|chr11 (11570425-11569833)
	5-624, gnl\|Mm7\|chr7 (107665122-107664536)