Non-Coding RNA Search

Ss1.1-rrec08_e2.5

Sequence:


               
               ACTTCCAGGCTCCCTCTAGCGCCCTCATGGCAGAGCTAACAGGGACCCTGCTCATAAAAA
CAGGTGGGTGGTGTGTCAGCCCCAGCATTCCAAACTATTGAAAAGGCTTCAAGCTGAGAC
AATAACTTAACAACCAAAACACCAGGAAGATTTAGGCTTACATGGAGAAAGATTTGAAAG
AAACAAAGCTGTAGCTCTGATATTTTTATTTTAGGAAGGAAACTGCATATTTGATGTTGT
AGATGCATATGGTATTTAAGAGAATAAGGCCCATTAGAATGACAGTTTTATAACTCCACT
TTAAAATGTATAATCGAGTAATTAATTTAGACTTAATGATTTATATGGTGACATCTGAGT
AAAGTATAAAAACATTTAAAATTCTCTTATTTATATATTTATTAGTTTCTGTGAGAATTT
AGGATTGGGAAAGCTTTTACGTGCTGTCAGAAAAACTGAAGTACTTTAAAAATAAATAAA
TATATTAAATTTATAAATGCATTCAAAAGCATTTGCAGTGCTGAGCTAAGCTTGTAGATA
GGACTAAGCATTATTCAAAGGCTTCTCCAGAATTATTACCACAATCTGCTATACTTAGAG
TAACAAATTTATAAGTTGAACTTAAAAATGTAAAAAAGTTTTCTTAACCTGTACCTTATA
TTGAATATGGATTCTAAAGACAAAATTATTAATGGTATGGTTTATTAAATACTTACTAAT
TACTTAAGCTTATTAAATATTATGTTAAAGCTAAATTTAAACATAATAAAAGTTTTTAAA
GGTGAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCCAGGCTCCCTCTAGCGCCCTCATGGCAGAGCTAACAGGGACCCTGCTCATAAAAA
CAGGTGGGTGGTGTGTCAGCCCCAGCATTCCAAACTATTGAAAAGGCTTCAAGCTGAGAC
AATAACTTAACAACCAAAACACCAGGAAGATTTAGGCTTACATGGAGAAAGATTTGAAAG
AAACAAAGCTGTAGCTCTGATATTTTTATTTTAGGAAGGAAACTGCATATTTGATGTTGT
AGATGCATATGGTATTTAAGAGAATAAGGCCCATTAGAATGACAGTTTTATAACTCCACT
TTAAAATGTATAATCGAGTAATTAATTTAGACTTAATGATTTATATGGTGACATCTGAGT
AAAGTATAAAAACATTTAAAATTCTCTTATTTATATATTTATTAGTTTCTGTGAGAATTT
AGGATTGGGAAAGCTTTTACGTGCTGTCAGAAAAACTGAAGTACTTTAAAAATAAATAAA
TATATTAAATTTATAAATGCATTCAAAAGCATTTGCAGTGCTGAGCTAAGCTTGTAGATA
GGACTAAGCATTATTCAAAGGCTTCTCCAGAATTATTACCACAATCTGCTATACTTAGAG
TAACAAATTTATAAGTTGAACTTAAAAATGTAAAAAAGTTTTCTTAACCTGTACCTTATA
TTGAATATGGATTCTAAAGACAAAATTATTAATGGTATGGTTTATTAAATACTTACTAAT
TACTTAAGCTTATTAAATATTATGTTAAAGCTAAATTTAAACATAATAAAAGTTTTTAAA
GGTGAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               5-792, gnl|bosTau2|chr15 (40478102-40478906)
               

               
               5-792, gnl|Mm7|chr2 (101562635-101563570)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-792, gnl|bosTau2|chr15 (40478102-40478906)
               

               
               5-792, gnl|Mm7|chr2 (101562635-101563570)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               rec (0.17307)
               

               
               lin (0.145603)
               

               
               ret (0.128733)
               

               
               ecc (0.115035)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               lin (0.145603)
               

               
               ret (0.128733)
               

               
               ecc (0.115035)

	5-792, gnl\|bosTau2\|chr15 (40478102-40478906)
	5-792, gnl\|Mm7\|chr2 (101562635-101563570)