Non-Coding RNA Search

Ss1.1-rrec08_g16.5

Sequence:


               
               GTTCCCTGAGAAAGTAGATGTACTAACTTGGGCAGAAGCATCTGCAGCTTCCTGAGCGTC
TTCTCTCCTCCCCTCCAGCTGCTTTGAAGAATCACAGTTGTAGTTAGCCATGCGGACTGG
CTAATTCTGAAAGAGCTGGTCGTGATTTCTCTTTGCCACCAACTCCCCTTTGCCCGTGAT
TTCGGGGAACCCAGGAGACCCCCTGGCCTCGTGTCTTTTCCTAAGGGTTCTCTCCTCCTG
TGTGCGTGGTAGATTCTCACACTGAGATGTGAAGAAAAGGTGAAGGCAGAGCATACAGAG
CAGGCGTGTATTTTTATGTGGGTGTTGCCTTTTTTTTTTTTTTTTCTTCACTGCTTTTTA
AATGGAAATCTTAAGCTGGCTTTCTTGAACTTTGACTTTAGGTGTAAAAATTGAACCCGA
CAGTCTCTGCTGACTGTAGTCAGCTGACAGAATCACCACTAAGACTTAATGAGCTTAACG
TGCACTTTCATCACTAGCAAAGGTCTTGGAATCATTTCCTGTACTGATTCATAATGGGTG
TGTGTATGAGTCACTCTCACATAATTTAGATTAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCCCTGAGAAAGTAGATGTACTAACTTGGGCAGAAGCATCTGCAGCTTCCTGAGCGTC
TTCTCTCCTCCCCTCCAGCTGCTTTGAAGAATCACAGTTGTAGTTAGCCATGCGGACTGG
CTAATTCTGAAAGAGCTGGTCGTGATTTCTCTTTGCCACCAACTCCCCTTTGCCCGTGAT
TTCGGGGAACCCAGGAGACCCCCTGGCCTCGTGTCTTTTCCTAAGGGTTCTCTCCTCCTG
TGTGCGTGGTAGATTCTCACACTGAGATGTGAAGAAAAGGTGAAGGCAGAGCATACAGAG
CAGGCGTGTATTTTTATGTGGGTGTTGCCTTTTTTTTTTTTTTTTCTTCACTGCTTTTTA
AATGGAAATCTTAAGCTGGCTTTCTTGAACTTTGACTTTAGGTGTAAAAATTGAACCCGA
CAGTCTCTGCTGACTGTAGTCAGCTGACAGAATCACCACTAAGACTTAATGAGCTTAACG
TGCACTTTCATCACTAGCAAAGGTCTTGGAATCATTTCCTGTACTGATTCATAATGGGTG
TGTGTATGAGTCACTCTCACATAATTTAGATTAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-559, gnl|bosTau2|chr19 (34370506-34369962)
               

               
               4-559, gnl|Hg17|chr17 (35692581-35693752)
               

               
               4-559, gnl|Mm7|chr11 (99013104-99013881)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-559, gnl|bosTau2|chr19 (34370506-34369962)
               

               
               4-559, gnl|Hg17|chr17 (35692581-35693752)
               

               
               4-559, gnl|Mm7|chr11 (99013104-99013881)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fce (0.271592)
               

               
               sin (0.174948)
               

               
               rec (0.17307)
               

               
               cki (0.165235)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               sin (0.174948)
               

               
               rec (0.17307)
               

               
               cki (0.165235)

	4-559, gnl\|bosTau2\|chr19 (34370506-34369962)
	4-559, gnl\|Hg17\|chr17 (35692581-35693752)
	4-559, gnl\|Mm7\|chr11 (99013104-99013881)