Non-Coding RNA Search

Ss1.1-rrec08_m4.5

Sequence:


               
               GGTGGTCTCAACCTTAATCATTGATGGAGCACCCAACAAAATTGATGAGAAGTGGAACTC
AGAATTTGTCTTCTTTGGTTCTGTTCATTATAAAATTTTGTAATGGATTCACTGATGTCA
TTCTTAATCTTTTGATATTATAAAGGAGTGTTGTAGGCTGGAGAAAATTGGCCTACATTC
TAAATATTTGAATTATGTCCAGAGCTTTGCAGAAATTATAAATTTATTATATATGTGGTT
TTTTGGAGCAAGTGTTAACACTAGGTAGAGGAATATTTCATGCAGTTGTATAATGCCAGA
AGAGTGAGTTATTTGGAAAATATAGTCATTCAGGTAAGTTTACATCAGTAATCTGATACA
TGGTTAATGGTAAATTTAAAAATCCAGGATACCCTGTTGGGCACAGGCCTTCTTATGATA
CAATGTAAAGGGGTCTGTTTTAAGTGGATTAACCCTATCAGTGTTCTTCAAAATGCCCAA
TTGTTATCATAGCAGAATCCTCAGTTATATAACATTGAGTAGATGAAATGTTTCATCGTC
AATGAGTAAGACACAGAGAAAGCACATTTTAACATTTTTAAAAATGATCTACACACAAAA
CAGCTTAAAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGGTCTCAACCTTAATCATTGATGGAGCACCCAACAAAATTGATGAGAAGTGGAACTC
AGAATTTGTCTTCTTTGGTTCTGTTCATTATAAAATTTTGTAATGGATTCACTGATGTCA
TTCTTAATCTTTTGATATTATAAAGGAGTGTTGTAGGCTGGAGAAAATTGGCCTACATTC
TAAATATTTGAATTATGTCCAGAGCTTTGCAGAAATTATAAATTTATTATATATGTGGTT
TTTTGGAGCAAGTGTTAACACTAGGTAGAGGAATATTTCATGCAGTTGTATAATGCCAGA
AGAGTGAGTTATTTGGAAAATATAGTCATTCAGGTAAGTTTACATCAGTAATCTGATACA
TGGTTAATGGTAAATTTAAAAATCCAGGATACCCTGTTGGGCACAGGCCTTCTTATGATA
CAATGTAAAGGGGTCTGTTTTAAGTGGATTAACCCTATCAGTGTTCTTCAAAATGCCCAA
TTGTTATCATAGCAGAATCCTCAGTTATATAACATTGAGTAGATGAAATGTTTCATCGTC
AATGAGTAAGACACAGAGAAAGCACATTTTAACATTTTTAAAAATGATCTACACACAAAA
CAGCTTAAAGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               97-604, gnl|bosTau2|chr21 (4294762-4295277)
               

               
               97-604, gnl|Hg17|chr15 (97746262-97746801)
               

               
               97-604, gnl|Mm7|chr7 (63369248-63368566)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               97-604, gnl|bosTau2|chr21 (4294762-4295277)
               

               
               97-604, gnl|Hg17|chr15 (97746262-97746801)
               

               
               97-604, gnl|Mm7|chr7 (63369248-63368566)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               rec (0.17307)
               

               
               bfe (0.149858)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               bfe (0.149858)

	97-604, gnl\|bosTau2\|chr21 (4294762-4295277)
	97-604, gnl\|Hg17\|chr15 (97746262-97746801)
	97-604, gnl\|Mm7\|chr7 (63369248-63368566)