Non-Coding RNA Search

Ss1.1-rrec09_b2.5

Sequence:


               
               TGGCGACGCTGTCTCTTTACAGCCAACTGATGACCAATCATAGAGTTTGATCAGTGTGTT
TAGACACTATCTTGAAAGCCAGATTTACATGCTGTGTATCACCTAATGCCTTGCTCTTAA
CCTTTACTTTTTTTGTACATTTTTTCAGAATATTTTTGGAAACATATCAGTACAATTTAC
AGTGTTTGGGGATGTCTTTAAATCTATTAAGATGTACATGAGTTAGCAATTTAAAGACAT
TTCTTCCCAAGTACGAGACTAGGCATCTTTTCAATTTCATTTTATTCGGTATTAATCAAT
CTTCTGAGGAAACAGAACTTTATTCTCAGGGTCAGCCATACACTTTATTGACCAGTACTT
GATAATCTTCTCTGTATATAATGAAAACATTTTTACACACTAACAGGAGCATTAACACAT
GATGGTTGCCATGGATATAATGGAATTATGGCCGAACTTTCTTTTGGAAGAAAACTTGAT
ATATTTCTCTGTGCATGGGTGTTCTCTTTGCCAGATTTGCCATGCAGTTCACTTGGGAAT
TCAGGTACATTAAGTGTGTGGGGGAACAGTGCATTCAGTAATTCCGACGTGACTGTGTGA
CGTGGTACAGACGTTACGGGCAACGTGGGACAAAAGCCCTCATCCCACGTGCAGAGGGCT
TCAATTAGACCTGTGACCTTGTATTTGGAAAAGCATATGTCTACAGCTAACCCCTTGGTC
CACTATTTAAGTTGTCTGGATTCTTTCCCGCCAGCTCTGCCCACTCGCCACCTCACATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCGACGCTGTCTCTTTACAGCCAACTGATGACCAATCATAGAGTTTGATCAGTGTGTT
TAGACACTATCTTGAAAGCCAGATTTACATGCTGTGTATCACCTAATGCCTTGCTCTTAA
CCTTTACTTTTTTTGTACATTTTTTCAGAATATTTTTGGAAACATATCAGTACAATTTAC
AGTGTTTGGGGATGTCTTTAAATCTATTAAGATGTACATGAGTTAGCAATTTAAAGACAT
TTCTTCCCAAGTACGAGACTAGGCATCTTTTCAATTTCATTTTATTCGGTATTAATCAAT
CTTCTGAGGAAACAGAACTTTATTCTCAGGGTCAGCCATACACTTTATTGACCAGTACTT
GATAATCTTCTCTGTATATAATGAAAACATTTTTACACACTAACAGGAGCATTAACACAT
GATGGTTGCCATGGATATAATGGAATTATGGCCGAACTTTCTTTTGGAAGAAAACTTGAT
ATATTTCTCTGTGCATGGGTGTTCTCTTTGCCAGATTTGCCATGCAGTTCACTTGGGAAT
TCAGGTACATTAAGTGTGTGGGGGAACAGTGCATTCAGTAATTCCGACGTGACTGTGTGA
CGTGGTACAGACGTTACGGGCAACGTGGGACAAAAGCCCTCATCCCACGTGCAGAGGGCT
TCAATTAGACCTGTGACCTTGTATTTGGAAAAGCATATGTCTACAGCTAACCCCTTGGTC
CACTATTTAAGTTGTCTGGATTCTTTCCCGCCAGCTCTGCCCACTCGCCACCTCACATCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               5-780, gnl|bosTau2|chr14 (42879726-42878963)
               

               
               5-780, gnl|Hg17|chr8 (96011808-96011048)
               

               
               5-780, gnl|Mm7|chr4 (11097179-11097922)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-780, gnl|bosTau2|chr14 (42879726-42878963)
               

               
               5-780, gnl|Hg17|chr8 (96011808-96011048)
               

               
               5-780, gnl|Mm7|chr4 (11097179-11097922)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               rec (0.17307)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               eje (0.0988338)

	5-780, gnl\|bosTau2\|chr14 (42879726-42878963)
	5-780, gnl\|Hg17\|chr8 (96011808-96011048)
	5-780, gnl\|Mm7\|chr4 (11097179-11097922)