Non-Coding RNA Search

Ss1.1-rrec12_l5.5

Sequence:


               
               CATATTTATATTTGAAATAAATGAGACATAATACTGAGAGGGAAAAAATCAACTGTCAGA
CTTGAATGGGACCAGTTTAGACAATATTTTTGATTCATTATCTAGTATGCTATGCTCAGG
AGAAGTATGTGTTGAAGTATATAGAGCAAAACAGTTGGTAAGGTGTGGTAATGAAGGGTA
AAAACAGACACGTTCCTTTCTGAAAAGGAAGAAGGGCTCTGCCTTGGAGCTTATCTTCAG
TTTTTAGAATTGGCTGTTGTTATTCTTAGTCCCACCAGAAGTGTGTTTATCCTGCGAGCA
TGTGCAGGGTGGGCTACCAGTTGTGTTCATCACACTAACAAGTTCAAATGCTAATGAGTG
TGTGTGTGTGTGTGTGTGGCATTGGCATTGGCATGTGTTGTTCCCGCATGTCTCTGATAC
TCATCCAAACTTTGCCTATAAAAATACACAACCTCTTCCTCTCCATACTTTAGGCTTCCC
ACTCTCTGAAAACAGTAGTAGTTCTTGTAGACGTTTCAGTGAGGAACTATGGTTCCACAA
ATAACAGAAATGCTAGATTGGTTTTGTTGTGGTAAATCTTTTTTCTGAATTCTTAATATG
TCAGTTTCCAGAGGAGGAGAACAGTACCCTCTGTGACTTTAAAGTTCCTTTCTCTTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATATTTATATTTGAAATAAATGAGACATAATACTGAGAGGGAAAAAATCAACTGTCAGA
CTTGAATGGGACCAGTTTAGACAATATTTTTGATTCATTATCTAGTATGCTATGCTCAGG
AGAAGTATGTGTTGAAGTATATAGAGCAAAACAGTTGGTAAGGTGTGGTAATGAAGGGTA
AAAACAGACACGTTCCTTTCTGAAAAGGAAGAAGGGCTCTGCCTTGGAGCTTATCTTCAG
TTTTTAGAATTGGCTGTTGTTATTCTTAGTCCCACCAGAAGTGTGTTTATCCTGCGAGCA
TGTGCAGGGTGGGCTACCAGTTGTGTTCATCACACTAACAAGTTCAAATGCTAATGAGTG
TGTGTGTGTGTGTGTGTGGCATTGGCATTGGCATGTGTTGTTCCCGCATGTCTCTGATAC
TCATCCAAACTTTGCCTATAAAAATACACAACCTCTTCCTCTCCATACTTTAGGCTTCCC
ACTCTCTGAAAACAGTAGTAGTTCTTGTAGACGTTTCAGTGAGGAACTATGGTTCCACAA
ATAACAGAAATGCTAGATTGGTTTTGTTGTGGTAAATCTTTTTTCTGAATTCTTAATATG
TCAGTTTCCAGAGGAGGAGAACAGTACCCTCTGTGACTTTAAAGTTCCTTTCTCTTTCCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-378, gnl|bosTau2|chr26 (22662250-22661885)
               

               
               1-378, gnl|Hg17|chr10 (115665272-115665966)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-378, gnl|bosTau2|chr26 (22662250-22661885)
               

               
               1-378, gnl|Hg17|chr10 (115665272-115665966)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               rec (0.17307)
               

               
               ski (0.146735)
               

               
               liv (0.146284)
               

               
               ste (0.135208)
               

               
               cty (0.10408)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               ski (0.146735)
               

               
               liv (0.146284)
               

               
               ste (0.135208)
               

               
               cty (0.10408)

	1-378, gnl\|bosTau2\|chr26 (22662250-22661885)
	1-378, gnl\|Hg17\|chr10 (115665272-115665966)

	rec (0.17307)
	ski (0.146735)
	liv (0.146284)
	ste (0.135208)
	cty (0.10408)