Non-Coding RNA Search

Ss1.1-rrec23_a16.5

Sequence:


               
               CTTTTGCCAGCAGAAGCGTAAGGAGACCACAACTTAGAAATTTGCAACGTGTTCCTCCTC
GGTGTAGACATTAGCCGATGTTTAGTTTTAGGCCAAGTTCTACAAATACAGTATTGATTT
GTATGCATTCTGGAGCCTTGCTATATCGTGGTTTGCGACAGCACGGGACTCAGCCTAGCA
TGGGGCCATTTGAACCTCAGTGAAAGTGGAAGCGTTACCGGAATCTTTGACATTGCCTTG
TAATGAGGTGCTTCCGTGAAAAGCCACCTCGGGATGGCATCGTAGTGAGGTCTCTGTGCA
TAAACATATATGCAGGACAAACGTGTGCACCAATCAAACCTAAAATTTTCTGTGACTGTC
AAATGAATATTATTTGGGTTAAGATTTTTTTCATTTCTGATTTGGATAGAAAATTGCTAT
TAATCTTGTATTAAAATAGTTTTTAAAAATCTAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTTGCCAGCAGAAGCGTAAGGAGACCACAACTTAGAAATTTGCAACGTGTTCCTCCTC
GGTGTAGACATTAGCCGATGTTTAGTTTTAGGCCAAGTTCTACAAATACAGTATTGATTT
GTATGCATTCTGGAGCCTTGCTATATCGTGGTTTGCGACAGCACGGGACTCAGCCTAGCA
TGGGGCCATTTGAACCTCAGTGAAAGTGGAAGCGTTACCGGAATCTTTGACATTGCCTTG
TAATGAGGTGCTTCCGTGAAAAGCCACCTCGGGATGGCATCGTAGTGAGGTCTCTGTGCA
TAAACATATATGCAGGACAAACGTGTGCACCAATCAAACCTAAAATTTTCTGTGACTGTC
AAATGAATATTATTTGGGTTAAGATTTTTTTCATTTCTGATTTGGATAGAAAATTGCTAT
TAATCTTGTATTAAAATAGTTTTTAAAAATCTAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-453, gnl|bosTau2|chr19 (31643482-31643026)
               

               
               3-453, gnl|Hg17|chr13 (93857200-93857656)
               

               
               3-453, gnl|Mm7|chr14 (112381040-112381499)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-453, gnl|bosTau2|chr19 (31643482-31643026)
               

               
               3-453, gnl|Hg17|chr13 (93857200-93857656)
               

               
               3-453, gnl|Mm7|chr14 (112381040-112381499)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               rec (0.17307)
               

               
               nca (0.136874)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               nca (0.136874)
               

               
               spc (0.113366)

	3-453, gnl\|bosTau2\|chr19 (31643482-31643026)
	3-453, gnl\|Hg17\|chr13 (93857200-93857656)
	3-453, gnl\|Mm7\|chr14 (112381040-112381499)