Non-Coding RNA Search

Ss1.1-rrec25_b15.5

Sequence:


               
               GACATGTTGCAATACAAGCTAATTCTAGCTGCTCAGTAACCTCTGGAGTTTTTAAAGGGA
CATTTTCCTGTACTTTTTCAAATAACGATGTTTAAAAAAAATTCTCTGAGCGTCATATAC
CTTTGCAAAAGGATGGTGGTTTGCAGTTAAGCCCTGGGCCCATCCTTCCTATTTCTGTAG
TATGCTGCAGCTTTAATCAGAAAGTCCATGGTTGCTGCTTCCTGATCTCCGAGTTACTCT
TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACATGTAATGGAAACTG
ATTTTGCCAAGCTCTTACGAGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTT
TACACTTTCAACCAAAAATTTATTAGGTATTTTTCAATGCTAAGTCTTGCCTTTTATTTT
TTAATTTCACTGCCAAGTTTGCAGTGGTTCTAAGTGAATCTGTGGGCATTTTAGCCTGTG
GTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATTTATTCAATATCTGTCAT
ATAATATCTATTTGGAAGAAGAAACTTTCTCTTGTAGTGCCTCTTGACAAAGCACAATTT
CCCGCCTTTTTTTTTTTTTTTGTGAAATGAAAAACAAATTGTGTTTTATTGCGGTATCAA
CAATGTGAATAAGGATTAACATATTGTAAATGTTCTTTTTTCCATGTAAATCAACTATCT
TTGTTATCACTAAGTGATAATTAATTTTTAACTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACATGTTGCAATACAAGCTAATTCTAGCTGCTCAGTAACCTCTGGAGTTTTTAAAGGGA
CATTTTCCTGTACTTTTTCAAATAACGATGTTTAAAAAAAATTCTCTGAGCGTCATATAC
CTTTGCAAAAGGATGGTGGTTTGCAGTTAAGCCCTGGGCCCATCCTTCCTATTTCTGTAG
TATGCTGCAGCTTTAATCAGAAAGTCCATGGTTGCTGCTTCCTGATCTCCGAGTTACTCT
TTTCCAAATTGTCTTCTTACACTGTTGCTGAAGGTCACTCTGTACATGTAATGGAAACTG
ATTTTGCCAAGCTCTTACGAGGTGGTTCATCTATCGATGGCATCCGCATTTGGTATCTTT
TACACTTTCAACCAAAAATTTATTAGGTATTTTTCAATGCTAAGTCTTGCCTTTTATTTT
TTAATTTCACTGCCAAGTTTGCAGTGGTTCTAAGTGAATCTGTGGGCATTTTAGCCTGTG
GTCTTGCCAGATCTTTGCGAATTACAATGCATATATGTCTATTTATTCAATATCTGTCAT
ATAATATCTATTTGGAAGAAGAAACTTTCTCTTGTAGTGCCTCTTGACAAAGCACAATTT
CCCGCCTTTTTTTTTTTTTTTGTGAAATGAAAAACAAATTGTGTTTTATTGCGGTATCAA
CAATGTGAATAAGGATTAACATATTGTAAATGTTCTTTTTTCCATGTAAATCAACTATCT
TTGTTATCACTAAGTGATAATTAATTTTTAACTTAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-756, gnl|bosTau2|chr2 (51538502-51537742)
               

               
               1-756, gnl|Hg17|chr2 (199960545-199959790)
               

               
               1-756, gnl|Mm7|chr1 (57043974-57043213)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-756, gnl|bosTau2|chr2 (51538502-51537742)
               

               
               1-756, gnl|Hg17|chr2 (199960545-199959790)
               

               
               1-756, gnl|Mm7|chr1 (57043974-57043213)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               fco (0.314416)
               

               
               rec (0.17307)
               

               
               ski (0.146735)
               

               
               lin (0.145603)
               

               
               ecc (0.115035)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               rec (0.17307)
               

               
               ski (0.146735)
               

               
               lin (0.145603)
               

               
               ecc (0.115035)

	1-756, gnl\|bosTau2\|chr2 (51538502-51537742)
	1-756, gnl\|Hg17\|chr2 (199960545-199959790)
	1-756, gnl\|Mm7\|chr1 (57043974-57043213)

	fco (0.314416)
	rec (0.17307)
	ski (0.146735)
	lin (0.145603)
	ecc (0.115035)