Ss1.1-rrec25_e10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTGTGTATCGCTTTTCCGGGTATGGTGCCCATGTGACCTCAGTTGTATTTTAGCTCTTTT TAAAATTAAGTTGGAGAGTCTTGACAAAAGCACAGTTGTGTGCATGGATCCTCTGATGTG TGATGCTCAGGGCTTGTCCTTCAACTCTCCTACAGGACAGGTCTCAGCACAGCATGTTCA TTATGCTCACTGAGAAGCTTTATTGCTCCAGGATTACAGCAGCAATCTCAGCAAGAAAAC ACCTAGGATGTTAAGTGAGCAGTTCTTCAGCAAATGTGATCTGGCAGGGAATGAAATTGA GTTTCCTGGTCCTCGGTTTGTGTTCTGGACAGTGCAGTAATGCAATATTACATTCCATTT GCACCCTTCCTTAGGGAAGAACTTTGTGGTTTTCTGCCTTCTGAGTGGAATGTTATAGAA GATATTAAGAAATCTTGGAATAGACATATTTTATTAATGTTTTTGATTTAGAATATTTCT TAAAAATTAAAAAATGGTGTAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTGTGTATCGCTTTTCCGGGTATGGTGCCCATGTGACCTCAGTTGTATTTTAGCTCTTTT TAAAATTAAGTTGGAGAGTCTTGACAAAAGCACAGTTGTGTGCATGGATCCTCTGATGTG TGATGCTCAGGGCTTGTCCTTCAACTCTCCTACAGGACAGGTCTCAGCACAGCATGTTCA TTATGCTCACTGAGAAGCTTTATTGCTCCAGGATTACAGCAGCAATCTCAGCAAGAAAAC ACCTAGGATGTTAAGTGAGCAGTTCTTCAGCAAATGTGATCTGGCAGGGAATGAAATTGA GTTTCCTGGTCCTCGGTTTGTGTTCTGGACAGTGCAGTAATGCAATATTACATTCCATTT GCACCCTTCCTTAGGGAAGAACTTTGTGGTTTTCTGCCTTCTGAGTGGAATGTTATAGAA GATATTAAGAAATCTTGGAATAGACATATTTTATTAATGTTTTTGATTTAGAATATTTCT TAAAAATTAAAAAATGGTGTAACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-297, gnl|bosTau2|chr13 (4827258-4826948) | |
| 1-297, gnl|Hg17|chr20 (25542680-25542376) | |
| 337-469, gnl|bosTau2|chr13 (4826934-4826801) | |
| 337-469, gnl|canFam2|chr23 (4756892-4757282) | |
| 337-469, gnl|canFam2|chr23 (4756906-4757282) | |
| 337-469, gnl|dasNov1|scaffold_159867 (474-828) | |
| 337-469, gnl|dasNov1|scaffold_159867 (494-828) | |
| 337-469, gnl|hg17|chr1 (109017144-109017483) | |
| 337-469, gnl|hg17|chr20 (25542178-25542541) | |
| 337-469, gnl|Hg17|chr20 (25542331-25542200) | |
| 337-469, gnl|loxAfr1|scaffold_44240 (7816-8200) | |
| 337-469, gnl|loxAfr1|scaffold_44240 (7839-8200) | |
| 337-469, gnl|mm7|chr2 (150769466-150769786) | |
| 337-469, gnl|mm7|chr2 (150769472-150769786) | |
| 337-469, gnl|Mm7|chr2 (150769618-150769497) | |
| 337-469, gnl|oryCun1|scaffold_97621 (8706-9050) | |
| 337-469, gnl|oryCun1|scaffold_97621 (8712-9050) | |
| 337-469, gnl|panTro1|chr1_random (4245240-4245581) | |
| 337-469, gnl|panTro1|chr21 (25991605-25991968) | |
| 337-469, gnl|rheMac2|chr1 (111759424-111759764) | |
| 337-469, gnl|rheMac2|chr10 (58837649-58838015) | |
| 337-469, gnl|rn3|chr3 (141543871-141544161) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-297, gnl|bosTau2|chr13 (4827258-4826948) | |
| 1-297, gnl|Hg17|chr20 (25542680-25542376) | |
| 337-469, gnl|bosTau2|chr13 (4826934-4826801) | |
| 337-469, gnl|canFam2|chr23 (4756892-4757282) | |
| 337-469, gnl|canFam2|chr23 (4756906-4757282) | |
| 337-469, gnl|dasNov1|scaffold_159867 (474-828) | |
| 337-469, gnl|dasNov1|scaffold_159867 (494-828) | |
| 337-469, gnl|hg17|chr1 (109017144-109017483) | |
| 337-469, gnl|hg17|chr20 (25542178-25542541) | |
| 337-469, gnl|Hg17|chr20 (25542331-25542200) | |
| 337-469, gnl|loxAfr1|scaffold_44240 (7816-8200) | |
| 337-469, gnl|loxAfr1|scaffold_44240 (7839-8200) | |
| 337-469, gnl|mm7|chr2 (150769466-150769786) | |
| 337-469, gnl|mm7|chr2 (150769472-150769786) | |
| 337-469, gnl|Mm7|chr2 (150769618-150769497) | |
| 337-469, gnl|oryCun1|scaffold_97621 (8706-9050) | |
| 337-469, gnl|oryCun1|scaffold_97621 (8712-9050) | |
| 337-469, gnl|panTro1|chr1_random (4245240-4245581) | |
| 337-469, gnl|panTro1|chr21 (25991605-25991968) | |
| 337-469, gnl|rheMac2|chr1 (111759424-111759764) | |
| 337-469, gnl|rheMac2|chr10 (58837649-58838015) | |
| 337-469, gnl|rn3|chr3 (141543871-141544161) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cte (0.29274) | |
| col (0.195008) | |
| rec (0.17307) | |
| spc (0.113366) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cte (0.29274) | |
| col (0.195008) | |
| rec (0.17307) | |
| spc (0.113366) |