Non-Coding RNA Search

Ss1.1-rrec35_o8.5

Sequence:


               
               TGAATGACTACTGTCCTGCGAGCTGAAAGCACCACACAGAATGGAAACGCTACAGTGTGT
GGTTGCGTCTATGAAATTAGTGGGTTCCTTGGAAAAAAATGGAACTTTTATAGCTCGGTG
GTTGAAATCAGAATAAATTATATTTCATTTGCCTGTTGCTGAACTCAAGTGATTATTGAA
ATTTTCAGATTCAAAATAGAAGACAGAAATAACTAATTTACAGTGTTAATGTTTGGATCA
TTGGAGAAGCTATTGGTGTAAGAATGTAAGGAAATTTTCATTATGGTTGCATGGTGTCTG
CCCAGTATTGTAGAGAAGTTGTTCACTCTGTCATTTACGAGATAGCAGTTCCTTGTGTAA
GATGACCAGACGTGTATATAGAGGGGTGATGGTGTCATGTGCCTTTAACCGAGCCTCAGC
AATGACGATATAATTTCATTTTTACAGTCGTTTTTATTAGGAGGACCAATTGAAAGGATT
TTGTGTTTTCCCATCACTTGAGATTTTATCACTGTGTGCATTTTTGGGTTTTTAGCATTT
GTCTAACATATGAACTTTTAATCATTGTAAGTATGTGTAATTTTTTCTTAATATTTAAAT
AAAGTATTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAATGACTACTGTCCTGCGAGCTGAAAGCACCACACAGAATGGAAACGCTACAGTGTGT
GGTTGCGTCTATGAAATTAGTGGGTTCCTTGGAAAAAAATGGAACTTTTATAGCTCGGTG
GTTGAAATCAGAATAAATTATATTTCATTTGCCTGTTGCTGAACTCAAGTGATTATTGAA
ATTTTCAGATTCAAAATAGAAGACAGAAATAACTAATTTACAGTGTTAATGTTTGGATCA
TTGGAGAAGCTATTGGTGTAAGAATGTAAGGAAATTTTCATTATGGTTGCATGGTGTCTG
CCCAGTATTGTAGAGAAGTTGTTCACTCTGTCATTTACGAGATAGCAGTTCCTTGTGTAA
GATGACCAGACGTGTATATAGAGGGGTGATGGTGTCATGTGCCTTTAACCGAGCCTCAGC
AATGACGATATAATTTCATTTTTACAGTCGTTTTTATTAGGAGGACCAATTGAAAGGATT
TTGTGTTTTCCCATCACTTGAGATTTTATCACTGTGTGCATTTTTGGGTTTTTAGCATTT
GTCTAACATATGAACTTTTAATCATTGTAAGTATGTGTAATTTTTTCTTAATATTTAAAT
AAAGTATTTTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               14-611, gnl|bosTau2|chr6 (60012608-60013200)
               

               
               14-611, gnl|Hg17|chr4 (4355909-4355349)
               

               
               14-611, gnl|Mm7|chr5 (37350490-37351014)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-611, gnl|bosTau2|chr6 (60012608-60013200)
               

               
               14-611, gnl|Hg17|chr4 (4355909-4355349)
               

               
               14-611, gnl|Mm7|chr5 (37350490-37351014)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

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               rec (0.17307)
               

               
               fco (0.157208)
               

               
               lin (0.145603)
               

               
               csk (0.140746)
               

               
               kid (0.129735)
               

               
               eje (0.0988338)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               fco (0.157208)
               

               
               lin (0.145603)
               

               
               csk (0.140746)
               

               
               kid (0.129735)
               

               
               eje (0.0988338)

	14-611, gnl\|bosTau2\|chr6 (60012608-60013200)
	14-611, gnl\|Hg17\|chr4 (4355909-4355349)
	14-611, gnl\|Mm7\|chr5 (37350490-37351014)

	rec (0.17307)
	fco (0.157208)
	lin (0.145603)
	csk (0.140746)
	kid (0.129735)
	eje (0.0988338)