Non-Coding RNA Search

Ss1.1-rrec39_k3.5

Sequence:


               
               ATTTTGAACTCAAGATACTTCCTGAACTGGTCTGAAAGACACTTGTCAAAAAAGCTTAGT
GATACTCTGTTAAGTGCTGAGTGGTCCCCTGAAAAGGTCTTTATTGTATTTCTAACAATA
GTCTTCCTCTTAAGCTCTTGCACTTCTAGATTCTGTCTTCTCACCTCCATCTTTGTCATC
ATCCACTATAAGTAGCCACCTTGACTCTGCAACTGGGTGAGAATATCTCTCTTTTTTGCC
TCCTTTCATTGTTTTTTCATATCCTGGTATTGTCAGAAGAAAGACAAGATAGATTTTTTA
AATTTCAGTTTAACTCTCTGAGGCAAGTAGAACCAATAAGATTGAGGATTCCGTTAGTGG
AATTTCGGTAAGCTTTTGATGCTAGTTGACAATCAAGAAATTGTATGACTTATAAGAACC
AAAACAATAAGATTTGATCAATCATTAAAGCCAAAGGAGATATATTTGCATTGAGAATGA
TATGAAACTTTGTCTAAAATGAATTAAATCGATTTATGAAATATCTCTGCATATTCAATT
CATGAAATCCATGTTCATCCTGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTGAACTCAAGATACTTCCTGAACTGGTCTGAAAGACACTTGTCAAAAAAGCTTAGT
GATACTCTGTTAAGTGCTGAGTGGTCCCCTGAAAAGGTCTTTATTGTATTTCTAACAATA
GTCTTCCTCTTAAGCTCTTGCACTTCTAGATTCTGTCTTCTCACCTCCATCTTTGTCATC
ATCCACTATAAGTAGCCACCTTGACTCTGCAACTGGGTGAGAATATCTCTCTTTTTTGCC
TCCTTTCATTGTTTTTTCATATCCTGGTATTGTCAGAAGAAAGACAAGATAGATTTTTTA
AATTTCAGTTTAACTCTCTGAGGCAAGTAGAACCAATAAGATTGAGGATTCCGTTAGTGG
AATTTCGGTAAGCTTTTGATGCTAGTTGACAATCAAGAAATTGTATGACTTATAAGAACC
AAAACAATAAGATTTGATCAATCATTAAAGCCAAAGGAGATATATTTGCATTGAGAATGA
TATGAAACTTTGTCTAAAATGAATTAAATCGATTTATGAAATATCTCTGCATATTCAATT
CATGAAATCCATGTTCATCCTGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-564, gnl|bosTau2|chr22 (1302007-1301433)
               

               
               1-564, gnl|Hg17|chr3 (30021950-30022512)
               

               
               1-564, gnl|Mm7|chr9 (116249384-116248813)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-564, gnl|bosTau2|chr22 (1302007-1301433)
               

               
               1-564, gnl|Hg17|chr3 (30021950-30022512)
               

               
               1-564, gnl|Mm7|chr9 (116249384-116248813)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               rec (0.17307)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)

	1-564, gnl\|bosTau2\|chr22 (1302007-1301433)
	1-564, gnl\|Hg17\|chr3 (30021950-30022512)
	1-564, gnl\|Mm7\|chr9 (116249384-116248813)