Non-Coding RNA Search

Ss1.1-rret01_l19.5

Sequence:


               
               GAAGTGAGAAGAAATAACTGCCCAATACAGCCTCAGCTCTTGAATAAAACCTGTAGGAGC
ATAACTAAACAAATTATTAATGTAGAAGGAAGCTGTGAAATTTGGAAATTGCTGTATGTA
ACCTTCTAAGGCTGGAGAACGGAGTGTGACCTAAGTCTTTTCTATATGGTCCTAAAGATT
TAATGATTATTTAAACAAAATGTCAGAGTTTTGATAATTAGTGGTCTAAAATCTTGATAC
TATTTATAGTCCTACAAAGAACAAAGGGTGTCAAGTAAGGTGCATACTTAAGGACTGTGA
GGAAAATTGTAGATCTCTTGGAAGAGAAAAATTACAACTAAGTTCTAAAAATTAGAGTTG
AAATTGTAGGTAATTGTCTACATTCTTGAGCAATAAGAATTCCTCATTTTAGTACATTTC
TTGTTTGTAGTAGAGGCTTGTCAGTTATTTAAGGAGTTTAATATAGCTCTAGGGGGCAGA
CTTGCTTTTTCTTTGTGTGCTGTTTTAATCCAAAGTCTGTGTCCTTAAATGCGCAATATG
TAGATAAATATATGAGGGTATGTATCAAGCTGCTCGGAGTTAAATTTAGGGAAATAAATG
CTTTTGAAAACTCCAACTTAAACTTTTGAGAAGCAAAGGAAAGCTTTGTTGCAAAGTATT
TCTTTGGATGCTGTTGTGTACTTTGCCATTAACCAAGTTTATGAAATTATTGAAATAAAA
TTCAGAATTTTTAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGTGAGAAGAAATAACTGCCCAATACAGCCTCAGCTCTTGAATAAAACCTGTAGGAGC
ATAACTAAACAAATTATTAATGTAGAAGGAAGCTGTGAAATTTGGAAATTGCTGTATGTA
ACCTTCTAAGGCTGGAGAACGGAGTGTGACCTAAGTCTTTTCTATATGGTCCTAAAGATT
TAATGATTATTTAAACAAAATGTCAGAGTTTTGATAATTAGTGGTCTAAAATCTTGATAC
TATTTATAGTCCTACAAAGAACAAAGGGTGTCAAGTAAGGTGCATACTTAAGGACTGTGA
GGAAAATTGTAGATCTCTTGGAAGAGAAAAATTACAACTAAGTTCTAAAAATTAGAGTTG
AAATTGTAGGTAATTGTCTACATTCTTGAGCAATAAGAATTCCTCATTTTAGTACATTTC
TTGTTTGTAGTAGAGGCTTGTCAGTTATTTAAGGAGTTTAATATAGCTCTAGGGGGCAGA
CTTGCTTTTTCTTTGTGTGCTGTTTTAATCCAAAGTCTGTGTCCTTAAATGCGCAATATG
TAGATAAATATATGAGGGTATGTATCAAGCTGCTCGGAGTTAAATTTAGGGAAATAAATG
CTTTTGAAAACTCCAACTTAAACTTTTGAGAAGCAAAGGAAAGCTTTGTTGCAAAGTATT
TCTTTGGATGCTGTTGTGTACTTTGCCATTAACCAAGTTTATGAAATTATTGAAATAAAA
TTCAGAATTTTTAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               243-738, gnl|bosTau2|chr24 (30127899-30127393)
               

               
               243-738, gnl|Hg17|chr18 (9949604-9950097)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               243-738, gnl|bosTau2|chr24 (30127899-30127393)
               

               
               243-738, gnl|Hg17|chr18 (9949604-9950097)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               bfe (0.299715)
               

               
               ret (0.257467)
               

               
               mgm (0.180343)
               

               
               ecc (0.115035)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.299715)
               

               
               ret (0.257467)
               

               
               mgm (0.180343)
               

               
               ecc (0.115035)

	243-738, gnl\|bosTau2\|chr24 (30127899-30127393)
	243-738, gnl\|Hg17\|chr18 (9949604-9950097)