Non-Coding RNA Search

Ss1.1-rret01_o2.5

Sequence:


               
               AATCTCAGCTCATTGTACATCAGAGGATTCATTCAGGGGAGAAACCCTATGGATGCAGTG
AATGTGGAAAAACCTTCTCTCAGAAATCAATTCTCAGTGCACATCAGAGGACTCATACAG
GAGAGAAACCCTGTAAATGCACTGAATGTGGGAAAGCCTTTTGTTGGAAGTCACAGCTCA
TTATGCATCAGAGAACTCATGCAGATGAGGAATGTATTGGTGAATTAAATGTAAGAAACT
TTGTCTCGAAAGTCAATTCACAGGAAGTTCGAGAAAGTTCAAACGGAAGAGAGACTTTGT
AAATGAAATCATCACATTGTACACCAGAAAACTCATACTGAATAGAAACTTTATGTATGT
ACAGCATGTGGAAGGGCATCCACAGTAAGCTGGTTTTTTATACACACAAAAAATACCAGT
AAATGTACACAGGAACCCTATGAATTCAGTTAACCCTGTGAAAGTTCTCAGTGGAAGTCA
TAACTTTAAGTTCATGCAGCTGAGGAAAAATATGAATGAAGTGAATGTCAGAAAGTCATT
TTTAATACACTAAACATTCATGAAAAGGAAATTCCATNACACAAATTAGGATAGAATACA
ATCCTTTGGAATTCATAATTTATTAAGGATTAAGATAATGAGAGAAAATACAGAACCAAT
GAATTAGAAATATCCGAAGCTCATACCTTGGAGAAATCATGCTATAAGTTAGGGAATTTC
TTCATCTAAAATTGACAAAACTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATCTCAGCTCATTGTACATCAGAGGATTCATTCAGGGGAGAAACCCTATGGATGCAGTG
AATGTGGAAAAACCTTCTCTCAGAAATCAATTCTCAGTGCACATCAGAGGACTCATACAG
GAGAGAAACCCTGTAAATGCACTGAATGTGGGAAAGCCTTTTGTTGGAAGTCACAGCTCA
TTATGCATCAGAGAACTCATGCAGATGAGGAATGTATTGGTGAATTAAATGTAAGAAACT
TTGTCTCGAAAGTCAATTCACAGGAAGTTCGAGAAAGTTCAAACGGAAGAGAGACTTTGT
AAATGAAATCATCACATTGTACACCAGAAAACTCATACTGAATAGAAACTTTATGTATGT
ACAGCATGTGGAAGGGCATCCACAGTAAGCTGGTTTTTTATACACACAAAAAATACCAGT
AAATGTACACAGGAACCCTATGAATTCAGTTAACCCTGTGAAAGTTCTCAGTGGAAGTCA
TAACTTTAAGTTCATGCAGCTGAGGAAAAATATGAATGAAGTGAATGTCAGAAAGTCATT
TTTAATACACTAAACATTCATGAAAAGGAAATTCCATNACACAAATTAGGATAGAATACA
ATCCTTTGGAATTCATAATTTATTAAGGATTAAGATAATGAGAGAAAATACAGAACCAAT
GAATTAGAAATATCCGAAGCTCATACCTTGGAGAAATCATGCTATAAGTTAGGGAATTTC
TTCATCTAAAATTGACAAAACTTC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               9-290, gnl|bosTau2|chrX (29044954-29044671)
               

               
               9-290, gnl|Mm7|chr5 (109295164-109295447)
               


               
               353-707, gnl|bosTau2|chr2 (78756454-78756807)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-290, gnl|bosTau2|chrX (29044954-29044671)
               

               
               9-290, gnl|Mm7|chr5 (109295164-109295447)
               


               
               353-707, gnl|bosTau2|chr2 (78756454-78756807)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ski (0.146735)
               

               
               ret (0.128733)
               

               
               tra (0.123092)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ski (0.146735)
               

               
               ret (0.128733)
               

               
               tra (0.123092)

	9-290, gnl\|bosTau2\|chrX (29044954-29044671)
	9-290, gnl\|Mm7\|chr5 (109295164-109295447)

	353-707, gnl\|bosTau2\|chr2 (78756454-78756807)