Non-Coding RNA Search

Ss1.1-rret01_o24.5

Sequence:


               
               CTTCCCATATCTCAAATCCCTGCAAGGACATGTGAGGATACACACTGGAGAGAAACCTTA
TGTGTGTAAGGAATGTGGGAAATCCTACAGTTGTCCCAAATACTTCAGAAAACATGAAAA
AAACACATAGTGGAGTAAAACCCTATGAATGTACAGAATGTGGGAAAGCCTTCATTACTT
CCTCATCCCTTCGAGAACATATGAAAACACACAGTGAAGAGAAGCCCTATCAGTGCCAGC
AGTGTGGGAAAGCCTTCAGGTACCCGAGATCCCTGCAAGGGCACATGATAACACACAGTG
AAGAGAAACCGTATGAATGTCTGCAATGTGAAAAGGCCTACAGGTGTCTCATATCCCTGC
AGAGACATATGAAGATACACAGTGGTGAAAAATTCTGAATACAAAGACTGTGGGAAAGCC
TTTATTCTCCCGTAAAAGCTTATAAATGTGAGCAGTCCCAGGAGGAAAAGCATGGAAAGA
ATGTGGGGAAATGTTCAGCACTTCACCTCTTTTATACTTGAAAACTCAGGGTAGGACAGA
AATCTTTTTGTAAGTGCCTTATCCTGAATAAAGATCCCAGTGTATTAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCCCATATCTCAAATCCCTGCAAGGACATGTGAGGATACACACTGGAGAGAAACCTTA
TGTGTGTAAGGAATGTGGGAAATCCTACAGTTGTCCCAAATACTTCAGAAAACATGAAAA
AAACACATAGTGGAGTAAAACCCTATGAATGTACAGAATGTGGGAAAGCCTTCATTACTT
CCTCATCCCTTCGAGAACATATGAAAACACACAGTGAAGAGAAGCCCTATCAGTGCCAGC
AGTGTGGGAAAGCCTTCAGGTACCCGAGATCCCTGCAAGGGCACATGATAACACACAGTG
AAGAGAAACCGTATGAATGTCTGCAATGTGAAAAGGCCTACAGGTGTCTCATATCCCTGC
AGAGACATATGAAGATACACAGTGGTGAAAAATTCTGAATACAAAGACTGTGGGAAAGCC
TTTATTCTCCCGTAAAAGCTTATAAATGTGAGCAGTCCCAGGAGGAAAAGCATGGAAAGA
ATGTGGGGAAATGTTCAGCACTTCACCTCTTTTATACTTGAAAACTCAGGGTAGGACAGA
AATCTTTTTGTAAGTGCCTTATCCTGAATAAAGATCCCAGTGTATTAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-427, gnl|bosTau2|chr17 (22473470-22473882)
               

               
               16-427, gnl|Hg17|chr5 (140620614-140621012)
               

               
               16-427, gnl|Mm7|chr9 (20221052-20220640)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-427, gnl|bosTau2|chr17 (22473470-22473882)
               

               
               16-427, gnl|Hg17|chr5 (140620614-140621012)
               

               
               16-427, gnl|Mm7|chr9 (20221052-20220640)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ova (0.258264)
               

               
               rec (0.17307)
               

               
               ret (0.128733)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.258264)
               

               
               rec (0.17307)
               

               
               ret (0.128733)

	16-427, gnl\|bosTau2\|chr17 (22473470-22473882)
	16-427, gnl\|Hg17\|chr5 (140620614-140621012)
	16-427, gnl\|Mm7\|chr9 (20221052-20220640)