Non-Coding RNA Search

Ss1.1-rret02_e24.5

Sequence:


               
               TAAAGTATTAAAAGAAGGGGAAAAGTTTGATCGGAAATCCACTGCAGTGAAGACAAAGAC
AATATTAGGTTATGATAATCATACATTAAAAAATCTATTGAGCCAAAAAAAAAAAAAAAA
AAGAAAGAGAGAGAGACAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAAAGAGACAGAGT
TAAATGTCATTTACTGAATGTTAACAAAACTTCTGTTCTTTATGGTGTCTAACACAAATG
GAGGATTAAAATTATGTGATTTTAAACAAAATCAGATAAACTTGTGTATAAACCAGAGCA
ACCAGGCAGTAATATGCCCATCCCATATTTGAAGAAAATTATTATCGAAAAAGAAAATCC
CACACATTTGCCAAGCACAATAATTGTAAAATAAAGTCCAAAAACATTCATTTCACCTGC
TTGCTAATGTGTATGAGTATTATCTGTTAATGGCATTTTTTTTCAAATGTAAATTCAAAG
AAAAGCTATCACTCATTTAAGAATCTAGGGATCCAAGCCCAGTAATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAGTATTAAAAGAAGGGGAAAAGTTTGATCGGAAATCCACTGCAGTGAAGACAAAGAC
AATATTAGGTTATGATAATCATACATTAAAAAATCTATTGAGCCAAAAAAAAAAAAAAAA
AAGAAAGAGAGAGAGACAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAAAGAGACAGAGT
TAAATGTCATTTACTGAATGTTAACAAAACTTCTGTTCTTTATGGTGTCTAACACAAATG
GAGGATTAAAATTATGTGATTTTAAACAAAATCAGATAAACTTGTGTATAAACCAGAGCA
ACCAGGCAGTAATATGCCCATCCCATATTTGAAGAAAATTATTATCGAAAAAGAAAATCC
CACACATTTGCCAAGCACAATAATTGTAAAATAAAGTCCAAAAACATTCATTTCACCTGC
TTGCTAATGTGTATGAGTATTATCTGTTAATGGCATTTTTTTTCAAATGTAAATTCAAAG
AAAAGCTATCACTCATTTAAGAATCTAGGGATCCAAGCCCAGTAATTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-528, gnl|bosTau2|chr16 (56965062-56965571)
               

               
               1-528, gnl|Hg17|chr1 (194632760-194633221)
               

               
               1-528, gnl|Mm7|chr1 (138708740-138708235)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-528, gnl|bosTau2|chr16 (56965062-56965571)
               

               
               1-528, gnl|Hg17|chr1 (194632760-194633221)
               

               
               1-528, gnl|Mm7|chr1 (138708740-138708235)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               ece (0.229305)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               ret (0.128733)

	1-528, gnl\|bosTau2\|chr16 (56965062-56965571)
	1-528, gnl\|Hg17\|chr1 (194632760-194633221)
	1-528, gnl\|Mm7\|chr1 (138708740-138708235)