Non-Coding RNA Search

Ss1.1-rret03_o7.5

Sequence:


               
               TAAAATCTGATTCTGGACATATTACCAATGAAGTCGAAACTCATTCTCTTAAAACTGATT
CAAATAATCTTGAAATGGCCACCAAGGAAGGAGATCATTCTGCAGATAATTTTCAAGAAA
TGTCACTTCCTAAAGAACAAACCACAAGTATACAAGATAATGCAGATCGGGATTTTCTTC
TCACTGAGAATTCGCTACACCAAGAGGAAGGTGAAAAAGAAAGTATGCCTTGTGGGGAAG
CAACAGCATTTAAACAAAAGCAGATTGTCAGTAAAGGAAAACAAGGAAAGGAACAAAATC
AGGACTCAGAGACTGAAGTAGAAGAGCTACGGAAACTCTGGAAAACCCATACTATGCAAC
AGACTAAACAGCAAAGGGAAAATATTCAACAGGTGTCACAAAAAGAAATTAAGCATAAAA
TAGCAACAGCCGATATTGAAGGTTCTGTACTTTTAAAAGAAAAGAGGAGGCATCGATTAC
ATAAGTTCTTATGTCTCAGGGTTGGAAAACCGATGAGGAAAACATTTGTATCTCAAGCAA
GTGCCACAATGCAGCAGTATGCACAGAGAGATAAGAAACATGAATATGGGTTTGCTGTGC
CACAAGAAAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAATCTGATTCTGGACATATTACCAATGAAGTCGAAACTCATTCTCTTAAAACTGATT
CAAATAATCTTGAAATGGCCACCAAGGAAGGAGATCATTCTGCAGATAATTTTCAAGAAA
TGTCACTTCCTAAAGAACAAACCACAAGTATACAAGATAATGCAGATCGGGATTTTCTTC
TCACTGAGAATTCGCTACACCAAGAGGAAGGTGAAAAAGAAAGTATGCCTTGTGGGGAAG
CAACAGCATTTAAACAAAAGCAGATTGTCAGTAAAGGAAAACAAGGAAAGGAACAAAATC
AGGACTCAGAGACTGAAGTAGAAGAGCTACGGAAACTCTGGAAAACCCATACTATGCAAC
AGACTAAACAGCAAAGGGAAAATATTCAACAGGTGTCACAAAAAGAAATTAAGCATAAAA
TAGCAACAGCCGATATTGAAGGTTCTGTACTTTTAAAAGAAAAGAGGAGGCATCGATTAC
ATAAGTTCTTATGTCTCAGGGTTGGAAAACCGATGAGGAAAACATTTGTATCTCAAGCAA
GTGCCACAATGCAGCAGTATGCACAGAGAGATAAGAAACATGAATATGGGTTTGCTGTGC
CACAAGAAAGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-443, gnl|bosTau2|chr14 (35055242-35055681)
               

               
               1-443, gnl|Hg17|chr8 (107788106-107788551)
               

               
               1-443, gnl|Mm7|chr15 (41819078-41819502)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-443, gnl|bosTau2|chr14 (35055242-35055681)
               

               
               1-443, gnl|Hg17|chr8 (107788106-107788551)
               

               
               1-443, gnl|Mm7|chr15 (41819078-41819502)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               tes (0.415628)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.415628)
               

               
               ret (0.128733)

	1-443, gnl\|bosTau2\|chr14 (35055242-35055681)
	1-443, gnl\|Hg17\|chr8 (107788106-107788551)
	1-443, gnl\|Mm7\|chr15 (41819078-41819502)