Non-Coding RNA Search

Ss1.1-rret06_e15.5

Sequence:


               
               GAAGAAGGAAATGTGTATATGACTGTTCATTGCAGTACTGTGTAGATAGAAAGACTGGCA
AAAGCCTCAATTTCCATCAACAGAAGCACAGGTAAATGGGTTGTTTTTGCTACTTTGGGA
AGTGACTATGGAAGAGCTAGAGTTAGCTCTTTCAACACAGATAAATCAACAGTGATGCTG
AGAAAGTTGTGGACACTACATATGATATACCATTTATACAAAGTTAAATGTACTGTGTAT
CTGTGGGCACATTGTTTAAACTTATTTGTGTTTCACTTTTTCTGTAAAATGAGATAGTAG
TGCCAACCTCACAGGGTGATGGGGGAGGGGGACAGTTAATGAATTAATGCATGTAAAGTG
CTTCAGGTAGTGGCTGGCATGTAAGCATTGTTGGCATACAGTAAACAGTGTTATTGTTTT
ATGCAATAATATATTTCCTGTGGATTCAAATTATATGAAGTGAAGAGTGAAGTCATGTGT
TGGAATGATATGTGAAAGCCGTGCTCTGCCTTTCCAGAGCAGAAGTTGCTGATGGAATCA
GGGAGGGTACATGCAGGCTTCAGTTGTGTTTTATTTCTTTTAAAAGGTTGATGTAGATGG
GGTCAGCATGTGGATTTAATGGGATCTGTGGTTGGTTCTTTTTTAACTGATTGCTTAAAA
TATCTCAAAATAAAAATATTTTTAAGCATGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGAAGGAAATGTGTATATGACTGTTCATTGCAGTACTGTGTAGATAGAAAGACTGGCA
AAAGCCTCAATTTCCATCAACAGAAGCACAGGTAAATGGGTTGTTTTTGCTACTTTGGGA
AGTGACTATGGAAGAGCTAGAGTTAGCTCTTTCAACACAGATAAATCAACAGTGATGCTG
AGAAAGTTGTGGACACTACATATGATATACCATTTATACAAAGTTAAATGTACTGTGTAT
CTGTGGGCACATTGTTTAAACTTATTTGTGTTTCACTTTTTCTGTAAAATGAGATAGTAG
TGCCAACCTCACAGGGTGATGGGGGAGGGGGACAGTTAATGAATTAATGCATGTAAAGTG
CTTCAGGTAGTGGCTGGCATGTAAGCATTGTTGGCATACAGTAAACAGTGTTATTGTTTT
ATGCAATAATATATTTCCTGTGGATTCAAATTATATGAAGTGAAGAGTGAAGTCATGTGT
TGGAATGATATGTGAAAGCCGTGCTCTGCCTTTCCAGAGCAGAAGTTGCTGATGGAATCA
GGGAGGGTACATGCAGGCTTCAGTTGTGTTTTATTTCTTTTAAAAGGTTGATGTAGATGG
GGTCAGCATGTGGATTTAATGGGATCTGTGGTTGGTTCTTTTTTAACTGATTGCTTAAAA
TATCTCAAAATAAAAATATTTTTAAGCATGAAAAAAAAAAAAAAAAAA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               1-690, gnl|bosTau2|chr22 (12549019-12549685)
               

               
               1-690, gnl|Hg17|chr3 (44458818-44458137)
               

               
               1-690, gnl|Mm7|chr9 (122555094-122554321)
               


               
               322-673, gnl|bosTau2|chr2 (10639531-10639880)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-690, gnl|bosTau2|chr22 (12549019-12549685)
               

               
               1-690, gnl|Hg17|chr3 (44458818-44458137)
               

               
               1-690, gnl|Mm7|chr9 (122555094-122554321)
               


               
               322-673, gnl|bosTau2|chr2 (10639531-10639880)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sto (0.179824)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sto (0.179824)
               

               
               ret (0.128733)

	1-690, gnl\|bosTau2\|chr22 (12549019-12549685)
	1-690, gnl\|Hg17\|chr3 (44458818-44458137)
	1-690, gnl\|Mm7\|chr9 (122555094-122554321)

	322-673, gnl\|bosTau2\|chr2 (10639531-10639880)