Ss1.1-rret07_d24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCACCTCTTGAGAATGTGGAGTGTGACAATATGAACCGCTTTGACCGATCAGACAGAAAT GTTCGGCAGTCTCAGGAAGGATTTTGGAAAAGGCCACCCCAGAGGTGGAGTGGACAGGAA CATTACCACCTCAGCCATCCTGACCACTATCATCACCATGGAAAAAGTGACTTGAGCAGA GGCTCTCCTTATAGAGAATCTCCTTTGGGTCATTTTGAAAGCTATGGAGGAACCCCCTTT TTCCAGGCTCAGAAGATGTTTGTAGATGTACCAGAAAATACAGTGATACTGGATGAGATG ACCCTCCGGCACATGGTTCAGGATTGCACCGCTGTAAAAACTCAGTTACTCAAACTGAAA CGGCTGCTACATCAGTCAGCATCTGTTTTGACCTTGGAGTAAGAAATGAAAAATCTAAAG TGGAATAATGAGAAGAACATGATGTTACCTCTTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCACCTCTTGAGAATGTGGAGTGTGACAATATGAACCGCTTTGACCGATCAGACAGAAAT GTTCGGCAGTCTCAGGAAGGATTTTGGAAAAGGCCACCCCAGAGGTGGAGTGGACAGGAA CATTACCACCTCAGCCATCCTGACCACTATCATCACCATGGAAAAAGTGACTTGAGCAGA GGCTCTCCTTATAGAGAATCTCCTTTGGGTCATTTTGAAAGCTATGGAGGAACCCCCTTT TTCCAGGCTCAGAAGATGTTTGTAGATGTACCAGAAAATACAGTGATACTGGATGAGATG ACCCTCCGGCACATGGTTCAGGATTGCACCGCTGTAAAAACTCAGTTACTCAAACTGAAA CGGCTGCTACATCAGTCAGCATCTGTTTTGACCTTGGAGTAAGAAATGAAAAATCTAAAG TGGAATAATGAGAAGAACATGATGTTACCTCTTTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 177-375, gnl|bosTau2|chr28 (29791437-29791635) | |
| 177-375, gnl|canFam2|chr4 (35865344-35865550) | |
| 177-375, gnl|canFam2|chr4 (35865348-35865514) | |
| 177-375, gnl|dasNov1|scaffold_102153 (510-304) | |
| 177-375, gnl|dasNov1|scaffold_8597 (43813-43647) | |
| 177-375, gnl|echTel1|scaffold_99025 (2747-2953) | |
| 177-375, gnl|echTel1|scaffold_99025 (2751-2917) | |
| 177-375, gnl|galGal2|chr6 (488906-489109) | |
| 177-375, gnl|hg17|chr10 (86188243-86188449) | |
| 177-375, gnl|Hg17|chr10 (86188245-86188443) | |
| 177-375, gnl|hg17|chr9 (102358886-102359052) | |
| 177-375, gnl|loxAfr1|scaffold_44201 (5393-5187) | |
| 177-375, gnl|loxAfr1|scaffold_44201 (5389-5223) | |
| 177-375, gnl|mm7|chr14 (34336770-34336564) | |
| 177-375, gnl|mm7|chr14 (34336764-34336600) | |
| 177-375, gnl|Mm7|chr14 (34336766-34336568) | |
| 177-375, gnl|monDom2|scaffold_41 (12386409-12386615) | |
| 177-375, gnl|monDom2|scaffold_41 (12386413-12386579) | |
| 177-375, gnl|oryCun1|scaffold_175201 (50477-50652) | |
| 177-375, gnl|oryCun1|scaffold_206071 (208324-208117) | |
| 177-375, gnl|panTro1|chr11 (86609584-86609750) | |
| 177-375, gnl|panTro1|chr8 (87748190-87748396) | |
| 177-375, gnl|rheMac2|chr15 (33695142-33694976) | |
| 177-375, gnl|rheMac2|chr9 (52843303-52843097) | |
| 177-375, gnl|rn3|chr16 (13088426-13088220) | |
| 177-375, gnl|rn3|chr16 (13088420-13088256) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 177-375, gnl|bosTau2|chr28 (29791437-29791635) | |
| 177-375, gnl|canFam2|chr4 (35865344-35865550) | |
| 177-375, gnl|canFam2|chr4 (35865348-35865514) | |
| 177-375, gnl|dasNov1|scaffold_102153 (510-304) | |
| 177-375, gnl|dasNov1|scaffold_8597 (43813-43647) | |
| 177-375, gnl|echTel1|scaffold_99025 (2747-2953) | |
| 177-375, gnl|echTel1|scaffold_99025 (2751-2917) | |
| 177-375, gnl|galGal2|chr6 (488906-489109) | |
| 177-375, gnl|hg17|chr10 (86188243-86188449) | |
| 177-375, gnl|Hg17|chr10 (86188245-86188443) | |
| 177-375, gnl|hg17|chr9 (102358886-102359052) | |
| 177-375, gnl|loxAfr1|scaffold_44201 (5393-5187) | |
| 177-375, gnl|loxAfr1|scaffold_44201 (5389-5223) | |
| 177-375, gnl|mm7|chr14 (34336770-34336564) | |
| 177-375, gnl|mm7|chr14 (34336764-34336600) | |
| 177-375, gnl|Mm7|chr14 (34336766-34336568) | |
| 177-375, gnl|monDom2|scaffold_41 (12386409-12386615) | |
| 177-375, gnl|monDom2|scaffold_41 (12386413-12386579) | |
| 177-375, gnl|oryCun1|scaffold_175201 (50477-50652) | |
| 177-375, gnl|oryCun1|scaffold_206071 (208324-208117) | |
| 177-375, gnl|panTro1|chr11 (86609584-86609750) | |
| 177-375, gnl|panTro1|chr8 (87748190-87748396) | |
| 177-375, gnl|rheMac2|chr15 (33695142-33694976) | |
| 177-375, gnl|rheMac2|chr9 (52843303-52843097) | |
| 177-375, gnl|rn3|chr16 (13088426-13088220) | |
| 177-375, gnl|rn3|chr16 (13088420-13088256) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lin (0.145603) | |
| ret (0.128733) |