Non-Coding RNA Search

Ss1.1-rret14_b16.5

Sequence:


               
               CATTTACCCATAATATTCCTACTTCACAAGCCAACTTAAGACATTGAATTTTCACATTAT
GCTTATATTTCTTCAATTCTAACACTGGTTATCACACAGTAATCAAGAAACTGTGAATGG
CAGTAATGCTTTTGATTAATTTTTTTTAATAAAGCCTATTGTTACATGCAATTTAATACT
TGAAAATATAGGGAAAGAATGGTAAAGGAATCCTTATGATAAAAATGTTGGGAGCCACTT
TTACAAAGGAACCAAGATTATTTGACTCCCACGGGTTGCTTACACTAGTCCCTAAATAAT
GAAATGCTAGATTATGTGTATGTATTTTGGCTAGATTGGGCTATATAACTTCAGGTTACA
ATTTGTTTTTATTCTCTTTCCGGATGATATAACTGAGCTAATTTATCTGGGTGTGTGTGT
GTAAATCATACATACACACAAACACAGGACTGTAAATATGGAAAGTGTTATAATGTCATG
TTGTAGGATTGGAGTAAATATCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTTACCCATAATATTCCTACTTCACAAGCCAACTTAAGACATTGAATTTTCACATTAT
GCTTATATTTCTTCAATTCTAACACTGGTTATCACACAGTAATCAAGAAACTGTGAATGG
CAGTAATGCTTTTGATTAATTTTTTTTAATAAAGCCTATTGTTACATGCAATTTAATACT
TGAAAATATAGGGAAAGAATGGTAAAGGAATCCTTATGATAAAAATGTTGGGAGCCACTT
TTACAAAGGAACCAAGATTATTTGACTCCCACGGGTTGCTTACACTAGTCCCTAAATAAT
GAAATGCTAGATTATGTGTATGTATTTTGGCTAGATTGGGCTATATAACTTCAGGTTACA
ATTTGTTTTTATTCTCTTTCCGGATGATATAACTGAGCTAATTTATCTGGGTGTGTGTGT
GTAAATCATACATACACACAAACACAGGACTGTAAATATGGAAAGTGTTATAATGTCATG
TTGTAGGATTGGAGTAAATATCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-504, gnl|bosTau2|chr24 (6453277-6452764)
               

               
               1-504, gnl|Hg17|chrX (72688854-72689330)
               

               
               1-504, gnl|Mm7|chrX (98722288-98722822)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-504, gnl|bosTau2|chr24 (6453277-6452764)
               

               
               1-504, gnl|Hg17|chrX (72688854-72689330)
               

               
               1-504, gnl|Mm7|chrX (98722288-98722822)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fhi (0.169578)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               ret (0.128733)

	1-504, gnl\|bosTau2\|chr24 (6453277-6452764)
	1-504, gnl\|Hg17\|chrX (72688854-72689330)
	1-504, gnl\|Mm7\|chrX (98722288-98722822)