Ss1.1-rret18_k6.5
|
GGGAACGAGCACATCCACCGGCTCTCTAGGCGGCCGACTCGGCTACGTGTGGAGATGGAG
GACTGGGAGGGCACCAAGCGCCATGCTGAGTACAGCCGCTTCGCTTTGGGCAATGAACTC
AACAGCTACCGCCTCTTCCTGGGCAACTACAGCGGCAGCGTGGGGAACGACGCCCTCAGC
TATCACAACAACACGGCCTTCAGCACCAAGGACAAGGACAACGACAATTGCTTAGACAAG
TGTGCCCAGCTCCGCAAAGGTGGATACTGGTACAACTGCTGCACGGACTCCAACCTCAAC
GGCGTGTACTACCTCCTCGGGGAGCACAACAAGCACCTGGATGGCATCACCTGGTACGGC
TGGCACGGGTCTAGCTACTCCCTCAAACGAGTGGAGATGAAAATCCGCCCAGAAGACTTC
CGGCCGTAAAAAGAGACAAAACCTGTTCTGCTGGAGGTGAGTGGACTGAGGTGGAATTGG
CTGGAGGAACCCCAGGGCACCACGCCTTTCACTGGCTCTGGGCACCTCCCTGCTAGGCCT
CCCTCACGGCGCAGCACTGATGAGGAGGCGGGAAGTGGGCCTAGCGGTGGCAGGAGCTCC
AACGGGAGGTGAAGATAAGTCCCCTGTGGACGCCTGCACAAAACTGCCTTAAAATAGTCA
CAGCCAATAACAGATATATCTATTTTTATTTACTTCGCAAGGAAAGGGCTCAAAGAACTT
CAAAGTGGCTAAAACAAGAAGGTAAATGGTACACGGCTAATAAGTAATTCATGCTGTATA
TATAAACATTTTGCTCTGTAAAAATAAAATAGCGTAGTTTGTTTTAAACATTAAAATTTT
TTTCTTCTTTCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGAACGAGCACATCCACCGGCTCTCTAGGCGGCCGACTCGGCTACGTGTGGAGATGGAG
GACTGGGAGGGCACCAAGCGCCATGCTGAGTACAGCCGCTTCGCTTTGGGCAATGAACTC
AACAGCTACCGCCTCTTCCTGGGCAACTACAGCGGCAGCGTGGGGAACGACGCCCTCAGC
TATCACAACAACACGGCCTTCAGCACCAAGGACAAGGACAACGACAATTGCTTAGACAAG
TGTGCCCAGCTCCGCAAAGGTGGATACTGGTACAACTGCTGCACGGACTCCAACCTCAAC
GGCGTGTACTACCTCCTCGGGGAGCACAACAAGCACCTGGATGGCATCACCTGGTACGGC
TGGCACGGGTCTAGCTACTCCCTCAAACGAGTGGAGATGAAAATCCGCCCAGAAGACTTC
CGGCCGTAAAAAGAGACAAAACCTGTTCTGCTGGAGGTGAGTGGACTGAGGTGGAATTGG
CTGGAGGAACCCCAGGGCACCACGCCTTTCACTGGCTCTGGGCACCTCCCTGCTAGGCCT
CCCTCACGGCGCAGCACTGATGAGGAGGCGGGAAGTGGGCCTAGCGGTGGCAGGAGCTCC
AACGGGAGGTGAAGATAAGTCCCCTGTGGACGCCTGCACAAAACTGCCTTAAAATAGTCA
CAGCCAATAACAGATATATCTATTTTTATTTACTTCGCAAGGAAAGGGCTCAAAGAACTT
CAAAGTGGCTAAAACAAGAAGGTAAATGGTACACGGCTAATAAGTAATTCATGCTGTATA
TATAAACATTTTGCTCTGTAAAAATAAAATAGCGTAGTTTGTTTTAAACATTAAAATTTT
TTTCTTCTTTCT
|
|
59-262, gnl|bosTau2|chr16 (22111097-22110894) |
|
59-262, gnl|canFam2|chr2 (87762153-87761948) |
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59-262, gnl|danRer3|chr8 (39105792-39105994) |
|
59-262, gnl|dasNov1|scaffold_28482 (13327-13122) |
|
59-262, gnl|fr1|chrUn (35320111-35319909) |
|
59-262, gnl|galGal2|chr21 (4025201-4025406) |
|
59-262, gnl|hg17|chr1 (11188782-11188987) |
|
59-262, gnl|Hg17|chr1 (11188782-11188985) |
|
59-262, gnl|loxAfr1|scaffold_2522 (33487-33696) |
|
59-262, gnl|mm7|chr4 (147486237-147486032) |
|
59-262, gnl|Mm7|chr4 (147486235-147486032) |
|
59-262, gnl|monDom2|scaffold_175 (1036770-1036565) |
|
59-262, gnl|oryCun1|scaffold_201999 (94197-94402) |
|
59-262, gnl|panTro1|chr1 (11398762-11398967) |
|
59-262, gnl|rheMac2|chr1 (14295498-14295703) |
|
59-262, gnl|rn3|chr5 (165590491-165590286) |
|
59-262, gnl|tetNig1|chrUn_random (119401793-119401994) |
|
59-262, gnl|xenTro1|scaffold_746 (583950-583672) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
59-262, gnl|bosTau2|chr16 (22111097-22110894) |
|
59-262, gnl|canFam2|chr2 (87762153-87761948) |
|
59-262, gnl|danRer3|chr8 (39105792-39105994) |
|
59-262, gnl|dasNov1|scaffold_28482 (13327-13122) |
|
59-262, gnl|fr1|chrUn (35320111-35319909) |
|
59-262, gnl|galGal2|chr21 (4025201-4025406) |
|
59-262, gnl|hg17|chr1 (11188782-11188987) |
|
59-262, gnl|Hg17|chr1 (11188782-11188985) |
|
59-262, gnl|loxAfr1|scaffold_2522 (33487-33696) |
|
59-262, gnl|mm7|chr4 (147486237-147486032) |
|
59-262, gnl|Mm7|chr4 (147486235-147486032) |
|
59-262, gnl|monDom2|scaffold_175 (1036770-1036565) |
|
59-262, gnl|oryCun1|scaffold_201999 (94197-94402) |
|
59-262, gnl|panTro1|chr1 (11398762-11398967) |
|
59-262, gnl|rheMac2|chr1 (14295498-14295703) |
|
59-262, gnl|rn3|chr5 (165590491-165590286) |
|
59-262, gnl|tetNig1|chrUn_random (119401793-119401994) |
|
59-262, gnl|xenTro1|scaffold_746 (583950-583672) |
|
ret (0.257467) |
|
aor (0.195274) |
|
cmu (0.186393) |
|
sto (0.179824) |
|
cut (0.169924) |
|
spc (0.113366) |
|
ret (0.257467) |
|
aor (0.195274) |
|
cmu (0.186393) |
|
sto (0.179824) |
|
cut (0.169924) |
|
spc (0.113366) |
