Non-Coding RNA Search

Ss1.1-rret18_m22.5

Sequence:


               
               GCACTGCTACTTGCATCTCATTTCCTCTATTCAGAAATTATAATATTTTTCCTGTCAGAT
TAAATGGAAAACTTTTTAATCCATAAGTTACTATTTTCATTCACATCAAAAGACTATGAA
ATTGAAAGACAAATGCTACTAAATATGATGAGATTGTTTAGTAAAATTTTACTGGTCAAA
AGGTGAATTTCTATGATTTATCTTTTTAAAATATATTTACAACCATCTTTTATTTTACAA
AAAATGTAAAATGAAATAACCATCATGCAACAGAGTACAATACAGAATGTATAGTTAGGA
TGAACAGTGAACTAATTTGCAGTGGTGAATAGAGATGTACAATGGATTTCCTTGGGACAG
TCTGCAAAGGATAGTTGTTGAAGCAAACACAAATTGTGTTTATATTCCTGAAGACAATCA
GAATGAATGTCTTTCTCCCACTAACTAACCAGGTATTAATTGACACCTTGGCACCAGAAA
TAAAGTCAAATAGATATCTCCATTCCAAAATACGCTTTTCTTTTTGGTCCATTTATATGC
TGAAGACATCCTGTCTATGGTAAGTTTCCTTCCACTAGACCTGATTGCATTAAACACTTA
ATATGCCCCCTTAGTATTTTCTATATCTTCATGTAGACCAAAAAATAGTGCATTGAGGTG
GTTAATAGAATTATGGTTGTTTCCTGTATTAAAATAAAATCCTAGAGGAGTTAGTTCCAA
CCAAATACAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACTGCTACTTGCATCTCATTTCCTCTATTCAGAAATTATAATATTTTTCCTGTCAGAT
TAAATGGAAAACTTTTTAATCCATAAGTTACTATTTTCATTCACATCAAAAGACTATGAA
ATTGAAAGACAAATGCTACTAAATATGATGAGATTGTTTAGTAAAATTTTACTGGTCAAA
AGGTGAATTTCTATGATTTATCTTTTTAAAATATATTTACAACCATCTTTTATTTTACAA
AAAATGTAAAATGAAATAACCATCATGCAACAGAGTACAATACAGAATGTATAGTTAGGA
TGAACAGTGAACTAATTTGCAGTGGTGAATAGAGATGTACAATGGATTTCCTTGGGACAG
TCTGCAAAGGATAGTTGTTGAAGCAAACACAAATTGTGTTTATATTCCTGAAGACAATCA
GAATGAATGTCTTTCTCCCACTAACTAACCAGGTATTAATTGACACCTTGGCACCAGAAA
TAAAGTCAAATAGATATCTCCATTCCAAAATACGCTTTTCTTTTTGGTCCATTTATATGC
TGAAGACATCCTGTCTATGGTAAGTTTCCTTCCACTAGACCTGATTGCATTAAACACTTA
ATATGCCCCCTTAGTATTTTCTATATCTTCATGTAGACCAAAAAATAGTGCATTGAGGTG
GTTAATAGAATTATGGTTGTTTCCTGTATTAAAATAAAATCCTAGAGGAGTTAGTTCCAA
CCAAATACAGAC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-692, gnl|bosTau2|chr29 (3411528-3410829)
               

               
               1-692, gnl|Hg17|chr11 (86711705-86712377)
               

               
               1-692, gnl|Mm7|chr7 (85077273-85076600)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-692, gnl|bosTau2|chr29 (3411528-3410829)
               

               
               1-692, gnl|Hg17|chr11 (86711705-86712377)
               

               
               1-692, gnl|Mm7|chr7 (85077273-85076600)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               ret (0.257467)
               

               
               isp (0.150376)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.257467)
               

               
               isp (0.150376)

	1-692, gnl\|bosTau2\|chr29 (3411528-3410829)
	1-692, gnl\|Hg17\|chr11 (86711705-86712377)
	1-692, gnl\|Mm7\|chr7 (85077273-85076600)